RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 DAAM2Q86T65 1068 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 CCDC197Q8NCU1 140 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 GLIS3Q8NEA6 775 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 CASKIN2Q8WXE0 1202 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 RAPGEF5Q92565 580 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 ZMAT2Q96NC0 199 aaKnown RBP16.61■□□□□ 0.25
FXN-201ENST00000377270 SIKE1Q9BRV8 207 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 FAM192AQ9GZU8 254 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 TAF1DQ9H5J8 278 aaPredicted RBP16.61■□□□□ 0.25
FXN-201ENST00000377270 TDRD3Q9H7E2 651 aaKnown RBP16.61■□□□□ 0.25
FXN-201ENST00000377270 PCDHA13Q9Y5I0 950 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 MYH7BA7E2Y1 1941 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 GOLGA6L10A0A0M3HER8 536 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 F5H6K3 240 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 IGF2BP3O00425 579 aaKnown RBP eCLIP16.61■□□□□ 0.25
FXN-201ENST00000377270 PYGMP11217 842 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 KLRC3Q07444 240 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 BIRC3Q13489 604 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 CAMK2BQ13554 666 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 AOC3Q16853 763 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 STYK1Q6J9G0 422 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 AGBL1Q96MI9 1066 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 ERGIC2Q96RQ1 377 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 NAP1L4Q99733 375 aaKnown RBP16.61■□□□□ 0.25
FXN-201ENST00000377270 ANO3Q9BYT9 981 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 RNF14Q9UBS8 474 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 SERPINA10Q9UK55 444 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 PRELID1Q9Y255 219 aa16.61■□□□□ 0.25
FXN-201ENST00000377270 CTDP1Q9Y5B0 961 aaPredicted RBP16.61■□□□□ 0.25
FXN-201ENST00000377270 KRT16P08779 473 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 IKQ13123 557 aaPredicted RBP16.6■□□□□ 0.25
FXN-201ENST00000377270 ABCB5Q2M3G0 1257 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 VWA3BQ502W6 1294 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 GRAMD4Q6IC98 578 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 TMEM179Q6ZVK1 233 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 FBF1Q8TES7 1133 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 ABCF3Q9NUQ8 709 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 KIAA1024Q9UPX6 916 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 BOLA2-SMG1P6H3BVE0 249 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 NCK2O43639 380 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 FGFR1OPO95684 399 aaKnown RBP16.6■□□□□ 0.25
FXN-201ENST00000377270 ACADSP16219 412 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 DRD4P21917 467 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 PPP2R2AP63151 447 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 LACTBP83111 547 aaPredicted RBP16.6■□□□□ 0.25
FXN-201ENST00000377270 SF3A3Q12874 501 aaKnown RBP eCLIP16.6■□□□□ 0.25
FXN-201ENST00000377270 IRGCQ6NXR0 463 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 POTEEQ6S8J3 1075 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 LSM14AQ8ND56 463 aaKnown RBP16.6■□□□□ 0.25
FXN-201ENST00000377270 DNAJC19Q96DA6 116 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 NT5C3AQ9H0P0 336 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 BMP2KQ9NSY1 1161 aaPredicted RBP16.6■□□□□ 0.25
FXN-201ENST00000377270 NKX1-2Q9UD57 310 aaPredicted RBP16.6■□□□□ 0.25
FXN-201ENST00000377270 ZNF711Q9Y462 761 aa16.6■□□□□ 0.25
FXN-201ENST00000377270 E9PMD0 336 aa16.59■□□□□ 0.25
FXN-201ENST00000377270 ITGA2BP08514 1039 aa16.59■□□□□ 0.25
FXN-201ENST00000377270 LRRC63Q05C16 580 aa16.59■□□□□ 0.25
FXN-201ENST00000377270 EHHADHQ08426 723 aa16.59■□□□□ 0.25
FXN-201ENST00000377270 LENG1Q96BZ8 264 aaPredicted RBP16.59■□□□□ 0.25
FXN-201ENST00000377270 MS4A14Q96JA4 679 aa16.59■□□□□ 0.25
FXN-201ENST00000377270 TLR10Q9BXR5 811 aa16.59■□□□□ 0.25
FXN-201ENST00000377270 SCN9AQ15858 1988 aa16.59■□□□□ 0.25
FXN-201ENST00000377270 UNCXA6NJT0 531 aa16.59■□□□□ 0.25
FXN-201ENST00000377270 MEIS2O14770 477 aa16.59■□□□□ 0.25
FXN-201ENST00000377270 PEX5P50542 639 aa16.59■□□□□ 0.25
FXN-201ENST00000377270 ODF2Q5BJF6 829 aa16.59■□□□□ 0.25
FXN-201ENST00000377270 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.59■□□□□ 0.253e-9■■■■■ 80.2
FXN-201ENST00000377270 INTUQ9ULD6 942 aa16.59■□□□□ 0.25
FXN-201ENST00000377270 KDM3AQ9Y4C1 1321 aa16.58■□□□□ 0.25
FXN-201ENST00000377270 H0YGN5 161 aa16.58■□□□□ 0.25
FXN-201ENST00000377270 ASLP04424 464 aa16.58■□□□□ 0.25
FXN-201ENST00000377270 MSH2P43246 934 aa16.58■□□□□ 0.25
FXN-201ENST00000377270 CACNA2D1P54289 1103 aa16.58■□□□□ 0.25
FXN-201ENST00000377270 RAD23BP54727 409 aa16.58■□□□□ 0.25
FXN-201ENST00000377270 GEMIN4P57678 1058 aaKnown RBP16.58■□□□□ 0.25
FXN-201ENST00000377270 NCALDP61601 193 aa16.58■□□□□ 0.25
FXN-201ENST00000377270 CYP4A11Q02928 519 aa16.58■□□□□ 0.25
FXN-201ENST00000377270 COASYQ13057 564 aa16.58■□□□□ 0.25
FXN-201ENST00000377270 ATP6V0A1Q93050 837 aa16.58■□□□□ 0.25
FXN-201ENST00000377270 TSG101Q99816 390 aa16.58■□□□□ 0.25
FXN-201ENST00000377270 TIPINQ9BVW5 301 aa16.58■□□□□ 0.25
FXN-201ENST00000377270 AMNQ9BXJ7 453 aa16.58■□□□□ 0.25
FXN-201ENST00000377270 TSKSQ9UJT2 592 aa16.58■□□□□ 0.25
FXN-201ENST00000377270 NFS1Q9Y697 457 aa16.58■□□□□ 0.25
FXN-201ENST00000377270 SIPA1L1O43166 1804 aa16.58■□□□□ 0.24
FXN-201ENST00000377270 NPM3O75607 178 aaKnown RBP16.58■□□□□ 0.24
FXN-201ENST00000377270 NDUFB10O96000 172 aa16.58■□□□□ 0.24
FXN-201ENST00000377270 ETS2P15036 469 aa16.58■□□□□ 0.24
FXN-201ENST00000377270 TCF7P36402 384 aaPredicted RBP16.58■□□□□ 0.24
FXN-201ENST00000377270 HSD17B3P37058 310 aa16.58■□□□□ 0.24
FXN-201ENST00000377270 STAT3P40763 770 aa16.58■□□□□ 0.24
FXN-201ENST00000377270 MAN2A1Q16706 1144 aa16.58■□□□□ 0.24
FXN-201ENST00000377270 FIGNQ5HY92 759 aa16.58■□□□□ 0.24
FXN-201ENST00000377270 HYIQ5T013 277 aa16.58■□□□□ 0.24
FXN-201ENST00000377270 LRRC43Q8N309 656 aa16.58■□□□□ 0.24
FXN-201ENST00000377270 KIF2BQ8N4N8 673 aa16.58■□□□□ 0.24
FXN-201ENST00000377270 SLC39A3Q9BRY0 314 aa16.58■□□□□ 0.24
FXN-201ENST00000377270 SLX4Q8IY92 1834 aa16.57■□□□□ 0.24
FXN-201ENST00000377270 A0A1W2PQJ5 194 aa16.57■□□□□ 0.24
FXN-201ENST00000377270 POTEB3A0JP26 581 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms