RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 IRF2BP1Q8IU81 584 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 GPD1LQ8N335 351 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 ANKRD20A12PQ8NF67 263 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 EEF2KMTQ96G04 330 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 FBXL18Q96ME1 805 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 METTL14Q9HCE5 456 aaKnown RBP25.02■■□□□ 1.6
HLA-C-202ENST00000376237 ERVK-5Q9HDB9 667 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 OGTO15294 1046 aa25.01■■□□□ 1.59
HLA-C-202ENST00000376237 EXTL3O43909 919 aa25.01■■□□□ 1.59
HLA-C-202ENST00000376237 EPB41P11171 864 aaKnown RBP25.01■■□□□ 1.59
HLA-C-202ENST00000376237 MARSP56192 900 aaKnown RBP25.01■■□□□ 1.59
HLA-C-202ENST00000376237 DCAF4L1Q3SXM0 396 aa25.01■■□□□ 1.59
HLA-C-202ENST00000376237 EEF1DP3Q658K8 133 aa25.01■■□□□ 1.59
HLA-C-202ENST00000376237 AKAP3O75969 853 aa25■■□□□ 1.59
HLA-C-202ENST00000376237 ZSCAN20P17040 1043 aaPredicted RBP25■■□□□ 1.59
HLA-C-202ENST00000376237 CD52P31358 61 aa25■■□□□ 1.59
HLA-C-202ENST00000376237 MBTPS1Q14703 1052 aa25■■□□□ 1.59
HLA-C-202ENST00000376237 FRMD5Q7Z6J6 570 aa25■■□□□ 1.59
HLA-C-202ENST00000376237 CNOT6LQ96LI5 555 aaKnown RBP25■■□□□ 1.59
HLA-C-202ENST00000376237 HAPLN2Q9GZV7 340 aa25■■□□□ 1.59
HLA-C-202ENST00000376237 CDT1Q9H211 546 aa25■■□□□ 1.59
HLA-C-202ENST00000376237 DNAH12Q6ZR08 3092 aa24.99■■□□□ 1.59
HLA-C-202ENST00000376237 KCNJ18B7U540 433 aa24.99■■□□□ 1.59
HLA-C-202ENST00000376237 KIAA0355O15063 1070 aa24.99■■□□□ 1.59
HLA-C-202ENST00000376237 CASP4P49662 377 aa24.99■■□□□ 1.59
HLA-C-202ENST00000376237 KCNJ12Q14500 433 aa24.99■■□□□ 1.59
HLA-C-202ENST00000376237 CCDC40Q4G0X9 1142 aa24.99■■□□□ 1.59
HLA-C-202ENST00000376237 TCP11X2Q5H9J9 407 aa24.99■■□□□ 1.59
HLA-C-202ENST00000376237 ZBTB33Q86T24 672 aa24.99■■□□□ 1.59
HLA-C-202ENST00000376237 FAM186BQ8IYM0 893 aa24.99■■□□□ 1.59
HLA-C-202ENST00000376237 IFIH1Q9BYX4 1025 aaKnown RBP24.99■■□□□ 1.59
HLA-C-202ENST00000376237 PPP1R12CQ9BZL4 782 aa24.99■■□□□ 1.59
HLA-C-202ENST00000376237 ZNF233A6NK53 670 aa24.98■■□□□ 1.59
HLA-C-202ENST00000376237 POU5F1Q01860 360 aaKnown RBP24.98■■□□□ 1.59
HLA-C-202ENST00000376237 SNRNP35Q16560 246 aaKnown RBP24.98■■□□□ 1.59
HLA-C-202ENST00000376237 CDR2LQ86X02 465 aaPredicted RBP24.98■■□□□ 1.59
HLA-C-202ENST00000376237 SAAL1Q96ER3 474 aa24.98■■□□□ 1.59
HLA-C-202ENST00000376237 HTATIP2Q9BUP3 242 aa24.98■■□□□ 1.59
HLA-C-202ENST00000376237 GRPEL1Q9HAV7 217 aa24.98■■□□□ 1.59
HLA-C-202ENST00000376237 ARMCX3Q9UH62 379 aaPredicted RBP24.98■■□□□ 1.59
HLA-C-202ENST00000376237 RFC2P35250 354 aa24.97■■□□□ 1.59
HLA-C-202ENST00000376237 HSP90AA4PQ58FG1 418 aa24.97■■□□□ 1.59
HLA-C-202ENST00000376237 TWF2Q6IBS0 349 aaKnown RBP24.97■■□□□ 1.59
HLA-C-202ENST00000376237 INTS8Q75QN2 995 aaKnown RBP24.97■■□□□ 1.59
HLA-C-202ENST00000376237 FAM213AQ9BRX8 229 aa24.97■■□□□ 1.59
HLA-C-202ENST00000376237 TRAIPQ9BWF2 469 aa24.97■■□□□ 1.59
HLA-C-202ENST00000376237 FTHL17Q9BXU8 183 aa24.97■■□□□ 1.59
HLA-C-202ENST00000376237 OSBPL7Q9BZF2 842 aa24.97■■□□□ 1.59
HLA-C-202ENST00000376237 TRIM6Q9C030 488 aaPredicted RBP24.97■■□□□ 1.59
HLA-C-202ENST00000376237 WNT8AQ9H1J5 351 aa24.97■■□□□ 1.59
HLA-C-202ENST00000376237 UMODL1Q5DID0 1318 aa24.97■■□□□ 1.59
HLA-C-202ENST00000376237 LRRC10BA6NIK2 292 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 NBNO60934 754 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 TIMP1P01033 207 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 HARSP12081 509 aaKnown RBP24.96■■□□□ 1.59
HLA-C-202ENST00000376237 CYP2C18P33260 490 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 MRE11P49959 708 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 ENPEPQ07075 957 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 USP37Q86T82 979 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 CREBRFQ8IUR6 639 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 RDH13Q8NBN7 331 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 APBB2Q92870 758 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 LIMA1Q9UHB6 759 aaKnown RBP24.96■■□□□ 1.59
HLA-C-202ENST00000376237 GOLGA8IPA6NC78 632 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 GOLGA8JA6NMD2 632 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 FAM189A1O60320 539 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 CXCL10P02778 98 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 TPM2P07951 284 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 ATP1A3P13637 1013 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 KRT13P13646 458 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 RAG1P15918 1043 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 CCL23P55773 120 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 PPP2R3AQ06190 1150 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 PLEKHG4Q58EX7 1191 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 BORCS6Q96GS4 357 aa24.96■■□□□ 1.59
HLA-C-202ENST00000376237 PRDM5Q9NQX1 630 aaPredicted RBP24.96■■□□□ 1.59
HLA-C-202ENST00000376237 CPSF3Q9UKF6 684 aaKnown RBP24.96■■□□□ 1.59
HLA-C-202ENST00000376237 CCDC85CA6NKD9 419 aa24.95■■□□□ 1.58
HLA-C-202ENST00000376237 NPTXRO95502 500 aa24.95■■□□□ 1.58
HLA-C-202ENST00000376237 CLTAP09496 248 aa24.95■■□□□ 1.58
HLA-C-202ENST00000376237 MTIF2P46199 727 aaKnown RBP24.95■■□□□ 1.58
HLA-C-202ENST00000376237 ACOT2P49753 483 aa24.95■■□□□ 1.58
HLA-C-202ENST00000376237 DSC3Q14574 896 aa24.95■■□□□ 1.58
HLA-C-202ENST00000376237 GPNMBQ14956 572 aa24.95■■□□□ 1.58
HLA-C-202ENST00000376237 CRELD2Q6UXH1 353 aaPredicted RBP24.95■■□□□ 1.58
HLA-C-202ENST00000376237 CBWD2Q8IUF1 395 aa24.95■■□□□ 1.58
HLA-C-202ENST00000376237 THNSL1Q8IYQ7 743 aa24.95■■□□□ 1.58
HLA-C-202ENST00000376237 SEPT8Q92599 483 aa24.95■■□□□ 1.58
HLA-C-202ENST00000376237 MFSD14AQ96MC6 490 aa24.95■■□□□ 1.58
HLA-C-202ENST00000376237 PRKAG2Q9UGJ0 569 aa24.95■■□□□ 1.58
HLA-C-202ENST00000376237 TRIM43BA6NCK2 446 aa24.94■■□□□ 1.58
HLA-C-202ENST00000376237 SERPINC1P01008 464 aa24.94■■□□□ 1.58
HLA-C-202ENST00000376237 SKIP12755 728 aa24.94■■□□□ 1.58
HLA-C-202ENST00000376237 GRM5P41594 1212 aa24.94■■□□□ 1.58
HLA-C-202ENST00000376237 RAB27AP51159 221 aa24.94■■□□□ 1.58
HLA-C-202ENST00000376237 MCCD1P59942 119 aaPredicted RBP24.94■■□□□ 1.58
HLA-C-202ENST00000376237 UBXN11Q5T124 520 aa24.94■■□□□ 1.58
HLA-C-202ENST00000376237 SARM1Q6SZW1 724 aa24.94■■□□□ 1.58
HLA-C-202ENST00000376237 TRIM59Q8IWR1 403 aa24.94■■□□□ 1.58
HLA-C-202ENST00000376237 TNS4Q8IZW8 715 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms