RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 STXBP2Q15833 593 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 SLFNL1Q499Z3 407 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 GPBP1L1Q9HC44 474 aaPredicted RBP13.16□□□□□ -0.3
HCFC1-202ENST00000369984 RNF123Q5XPI4 1314 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 ESYT3A0FGR9 886 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 NCK2O43639 380 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 TMA16Q96EY4 203 aaKnown RBP13.16□□□□□ -0.3
HCFC1-202ENST00000369984 ZNF341Q9BYN7 854 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 TMEM191CA6NGB0 347 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 APOL1O14791 398 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 CDK8P49336 464 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 FAM213AQ9BRX8 229 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 GOLPH3LQ9H4A5 285 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 ZNF556Q9HAH1 456 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 SENP1Q9P0U3 644 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 PLEKHA8P1O95397 391 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 TBL3Q12788 808 aaKnown RBP13.16□□□□□ -0.3
HCFC1-202ENST00000369984 MKRN3Q13064 507 aaKnown RBP13.16□□□□□ -0.3
HCFC1-202ENST00000369984 CLEC4FQ8N1N0 589 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 XXYLT1Q8NBI6 393 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 CLCA2Q9UQC9 943 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 MYL3P08590 195 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 MAPK6Q16659 721 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 ACCSLQ4AC99 568 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 ITPRIPL1Q6GPH6 555 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 MXD3Q9BW11 206 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 EPN3Q9H201 632 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 PARVAQ9NVD7 372 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 IMPDH2P12268 514 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 KCNA2P16389 499 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 TAS2R42Q7RTR8 314 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 MFN1Q8IWA4 741 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 MRPL1Q9BYD6 325 aaKnown RBP13.16□□□□□ -0.3
HCFC1-202ENST00000369984 SLC7A5P2Q9GIP4 190 aa13.16□□□□□ -0.3
HCFC1-202ENST00000369984 ENO4A6NNW6 628 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 M0QYV0 167 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 RUBCNQ92622 972 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 TBC1D23Q9NUY8 699 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 MAP2P11137 1827 aaKnown RBP13.15□□□□□ -0.3
HCFC1-202ENST00000369984 NNMTP40261 264 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 DMPKQ09013 629 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 FASTKD5Q7L8L6 764 aaKnown RBP13.15□□□□□ -0.3
HCFC1-202ENST00000369984 ASIC4Q96FT7 647 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 ACAP3Q96P50 834 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 ARIH1Q9Y4X5 557 aaPredicted RBP13.15□□□□□ -0.3
HCFC1-202ENST00000369984 CDC42BPBQ9Y5S2 1711 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 RC3H1Q5TC82 1133 aaKnown RBP13.15□□□□□ -0.3
HCFC1-202ENST00000369984 THEMIS2Q5TEJ8 643 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 CATSPER4Q7RTX7 472 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 RHPN2Q8IUC4 686 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 PGBD4Q96DM1 585 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 ANTXR1Q9H6X2 564 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 GNAT1P11488 350 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 DTX3LQ8TDB6 740 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 UNC45AQ9H3U1 944 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 NUMA1Q14980 2115 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 TARSL2A2RTX5 802 aaKnown RBP13.15□□□□□ -0.3
HCFC1-202ENST00000369984 AKAP10O43572 662 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 PRELPP51888 382 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 COASYQ13057 564 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 DHX34Q14147 1143 aaKnown RBP13.15□□□□□ -0.3
HCFC1-202ENST00000369984 ERFEQ4G0M1 354 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 TTC23LQ6PF05 361 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 ARMCX6Q7L4S7 300 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 FAM160B2Q86V87 743 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 CDR2LQ86X02 465 aaPredicted RBP13.15□□□□□ -0.3
HCFC1-202ENST00000369984 RHBDL2Q9NX52 303 aa13.15□□□□□ -0.3
HCFC1-202ENST00000369984 POTEMA6NI47 508 aa13.15□□□□□ -0.31
HCFC1-202ENST00000369984 TLR2O60603 784 aa13.15□□□□□ -0.31
HCFC1-202ENST00000369984 TWF2Q6IBS0 349 aaKnown RBP13.15□□□□□ -0.31
HCFC1-202ENST00000369984 ZNF579Q8NAF0 562 aaKnown RBP13.15□□□□□ -0.31
HCFC1-202ENST00000369984 ALG13Q9NP73 1137 aaKnown RBP13.15□□□□□ -0.31
HCFC1-202ENST00000369984 MEFVO15553 781 aaPredicted RBP13.14□□□□□ -0.31
HCFC1-202ENST00000369984 SDC4P31431 198 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 ZNF467Q7Z7K2 595 aaPredicted RBP13.14□□□□□ -0.31
HCFC1-202ENST00000369984 BEST2Q8NFU1 509 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 RFWD2Q8NHY2 731 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 TOPORSQ9NS56 1045 aaPredicted RBP13.14□□□□□ -0.31
HCFC1-202ENST00000369984 DENND3A2RUS2 1198 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 PHKA2P46019 1235 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 KNOP1Q1ED39 458 aaKnown RBP13.14□□□□□ -0.31
HCFC1-202ENST00000369984 USPL1Q5W0Q7 1092 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 THNSL1Q8IYQ7 743 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 URGCPQ8TCY9 931 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 DTNBP1Q96EV8 351 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 DDX47Q9H0S4 455 aaKnown RBP13.14□□□□□ -0.31
HCFC1-202ENST00000369984 TCHHQ07283 1943 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 MYH6P13533 1939 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 LIFRP42702 1097 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 DRAP1Q14919 205 aaPredicted RBP13.14□□□□□ -0.31
HCFC1-202ENST00000369984 ZNF746Q6NUN9 644 aaPredicted RBP13.14□□□□□ -0.31
HCFC1-202ENST00000369984 OSBP2Q969R2 916 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 IL17RAQ96F46 866 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 ANO9A1A5B4 782 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 EFHC2Q5JST6 749 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 RHOT1Q8IXI2 618 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 C1orf54Q8WWF1 131 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 RAD54LQ92698 747 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 WWP1Q9H0M0 922 aa13.14□□□□□ -0.31
HCFC1-202ENST00000369984 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms