RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 UBAP2Q5T6F2 1119 aaKnown RBP18.68■□□□□ 0.58
CHTOP-203ENST00000368690 TMEM237Q96Q45 408 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 LRMDAQ9H2I8 198 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 JMJD4Q9H9V9 463 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 TMOD4Q9NZQ9 345 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 PNMA3Q9UL41 463 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 RPL26L1Q9UNX3 145 aaKnown RBP18.68■□□□□ 0.58
CHTOP-203ENST00000368690 STK38LQ9Y2H1 464 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 EIF3DO15371 548 aaKnown RBP eCLIP18.68■□□□□ 0.58
CHTOP-203ENST00000368690 LINGO3P0C6S8 592 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 RPA1P27694 616 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 PTGER2P43116 358 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 CALCOCO2Q13137 446 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 RRP1BQ14684 758 aaKnown RBP18.68■□□□□ 0.58
CHTOP-203ENST00000368690 GJA10Q969M2 543 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 SGIP1Q9BQI5 828 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 RNPEPL1Q9HAU8 725 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 OLFML3Q9NRN5 406 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 MTMR4Q9NYA4 1195 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 ACTL7BQ9Y614 415 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 SCN9AQ15858 1988 aa18.68■□□□□ 0.58
CHTOP-203ENST00000368690 TBX3O15119 743 aa18.67■□□□□ 0.58
CHTOP-203ENST00000368690 CALB2P22676 271 aa18.67■□□□□ 0.58
CHTOP-203ENST00000368690 FMO5P49326 533 aa18.67■□□□□ 0.58
CHTOP-203ENST00000368690 PICALMQ13492 652 aa18.67■□□□□ 0.58
CHTOP-203ENST00000368690 LRRC14Q15048 493 aa18.67■□□□□ 0.58
CHTOP-203ENST00000368690 DACT2Q5SW24 774 aa18.67■□□□□ 0.58
CHTOP-203ENST00000368690 AP1ARQ63HQ0 302 aa18.67■□□□□ 0.58
CHTOP-203ENST00000368690 ARHGEF18Q6ZSZ5 1173 aa18.67■□□□□ 0.58
CHTOP-203ENST00000368690 EGFL6Q8IUX8 553 aa18.67■□□□□ 0.58
CHTOP-203ENST00000368690 TEKT1Q969V4 418 aa18.67■□□□□ 0.58
CHTOP-203ENST00000368690 CDC42EP4Q9H3Q1 356 aaKnown RBP18.67■□□□□ 0.58
CHTOP-203ENST00000368690 LGALS13Q9UHV8 139 aa18.67■□□□□ 0.58
CHTOP-203ENST00000368690 GGT7Q9UJ14 662 aa18.67■□□□□ 0.58
CHTOP-203ENST00000368690 GAKO14976 1311 aa18.67■□□□□ 0.58
CHTOP-203ENST00000368690 PPP1R11O60927 126 aaPredicted RBP18.66■□□□□ 0.58
CHTOP-203ENST00000368690 GAP43P17677 238 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 MRPS35P82673 323 aaKnown RBP18.66■□□□□ 0.58
CHTOP-203ENST00000368690 POTEGQ6S5H5 508 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 CATSPER3Q86XQ3 398 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 FAM186BQ8IYM0 893 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 ZDHHC14Q8IZN3 488 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 UHMK1Q8TAS1 419 aaKnown RBP18.66■□□□□ 0.58
CHTOP-203ENST00000368690 INPP5DQ92835 1189 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 FAM163AQ96GL9 167 aaPredicted RBP18.66■□□□□ 0.58
CHTOP-203ENST00000368690 RMDN2Q96LZ7 410 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 TGS1Q96RS0 853 aaKnown RBP18.66■□□□□ 0.58
CHTOP-203ENST00000368690 OSBPL1AQ9BXW6 950 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 PSTPIP2Q9H939 334 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 ADGRA3Q8IWK6 1321 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 YDJCA8MPS7 323 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 RAD17O75943 681 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 RWDD2BP57060 319 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 SPIRE1Q08AE8 756 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 ZNF543Q08ER8 600 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 STRN3Q13033 797 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 LONRF1Q17RB8 773 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 PPP1R21Q6ZMI0 780 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 SLC13A5Q86YT5 568 aaPredicted RBP18.66■□□□□ 0.58
CHTOP-203ENST00000368690 CCDC105Q8IYK2 499 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 ADGRF4Q8IZF3 695 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 LRRC19Q9H756 370 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 APEX2Q9UBZ4 518 aa18.66■□□□□ 0.58
CHTOP-203ENST00000368690 ITIH2P19823 946 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 INHBEP58166 350 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 CTTNQ14247 550 aaKnown RBP18.65■□□□□ 0.58
CHTOP-203ENST00000368690 RBBP5Q15291 538 aaKnown RBP18.65■□□□□ 0.58
CHTOP-203ENST00000368690 SPDYAQ5MJ70 313 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 CGB2Q6NT52 195 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 RHBDF2Q6PJF5 856 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 SYDE1Q6ZW31 735 aaPredicted RBP18.65■□□□□ 0.58
CHTOP-203ENST00000368690 MIGA2Q7L4E1 593 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 LMNTD2Q8IXW0 634 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 ENDOVQ8N8Q3 282 aaKnown RBP18.65■□□□□ 0.58
CHTOP-203ENST00000368690 MGARPQ8TDB4 240 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 KRT35Q92764 455 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 CD101Q93033 1021 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 AGPAT1Q99943 283 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 ETNK1Q9HBU6 452 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 TAS2R14Q9NYV8 317 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 PCDHB13Q9Y5F0 798 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 IGKV6D-41A0A0C4DH26 115 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 TGFB1I1O43294 461 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 ECEL1O95672 775 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 TTC4O95801 387 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 MGAT5Q09328 741 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 LBRQ14739 615 aaKnown RBP18.65■□□□□ 0.58
CHTOP-203ENST00000368690 SIX1Q15475 284 aaPredicted RBP18.65■□□□□ 0.58
CHTOP-203ENST00000368690 SGSM1Q2NKQ1 1148 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 ECHDC2Q86YB7 292 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 ANKLE1Q8NAG6 615 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 STK32AQ8WU08 396 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 UTP4Q969X6 686 aaKnown RBP18.65■□□□□ 0.58
CHTOP-203ENST00000368690 INTS2Q9H0H0 1204 aaKnown RBP18.65■□□□□ 0.58
CHTOP-203ENST00000368690 AAASQ9NRG9 546 aa18.65■□□□□ 0.58
CHTOP-203ENST00000368690 UBE4BO95155 1302 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 EME2A4GXA9 379 aaPredicted RBP18.64■□□□□ 0.57
CHTOP-203ENST00000368690 ANKRD63C9JTQ0 380 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 ZBTB5O15062 677 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 SPATA31C1P0DKV0 1188 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms