RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 FITM2Q8N6M3 262 aa21.06■□□□□ 0.96
TRIM58-201ENST00000366481 CCDC17Q96LX7 622 aa21.06■□□□□ 0.96
TRIM58-201ENST00000366481 DPPA5A6NC42 116 aa21.05■□□□□ 0.96
TRIM58-201ENST00000366481 TMEM150BA6NC51 233 aa21.05■□□□□ 0.96
TRIM58-201ENST00000366481 FAM84AQ96KN4 292 aa21.05■□□□□ 0.96
TRIM58-201ENST00000366481 PDXKO00764 312 aa21.05■□□□□ 0.96
TRIM58-201ENST00000366481 TGS1Q96RS0 853 aaKnown RBP21.05■□□□□ 0.96
TRIM58-201ENST00000366481 CSRNP1Q96S65 589 aa21.05■□□□□ 0.96
TRIM58-201ENST00000366481 FBXO28Q9NVF7 368 aa21.05■□□□□ 0.96
TRIM58-201ENST00000366481 PRR12Q9ULL5 1215 aa21.05■□□□□ 0.96
TRIM58-201ENST00000366481 PITPNM2Q9BZ72 1349 aa21.05■□□□□ 0.96
TRIM58-201ENST00000366481 SLITRK3O94933 977 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 STAT1P42224 750 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 ABL2P42684 1182 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 PTENP60484 403 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 CALCOCO2Q13137 446 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 SETDB1Q15047 1291 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 CCDC6Q16204 474 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 ODR4Q5SWX8 454 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 EPM2AIP1Q7L775 607 aaPredicted RBP21.04■□□□□ 0.96
TRIM58-201ENST00000366481 SYCP3Q8IZU3 236 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 RAB3IPQ96QF0 476 aaPredicted RBP21.04■□□□□ 0.96
TRIM58-201ENST00000366481 ZCWPW1Q9H0M4 648 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 LTBP4Q8N2S1 1624 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 ATMINO43313 823 aaPredicted RBP21.04■□□□□ 0.96
TRIM58-201ENST00000366481 LINGO3P0C6S8 592 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 PECAM1P16284 738 aaPredicted RBP21.04■□□□□ 0.96
TRIM58-201ENST00000366481 PAPOLAP51003 745 aaKnown RBP21.04■□□□□ 0.96
TRIM58-201ENST00000366481 DUPD1Q68J44 220 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 MIGA2Q7L4E1 593 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 CYP3A7-CYP3A51PA0A087WV96 503 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 NUDT17P0C025 328 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 CYP3A7P24462 503 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 RPL13P26373 211 aaKnown RBP21.04■□□□□ 0.96
TRIM58-201ENST00000366481 KCNJ1P48048 391 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 DLG4P78352 724 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 MUM1Q2TAK8 710 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 HHIPL2Q6UWX4 724 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 SEPT14Q6ZU15 432 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 COL23A1Q86Y22 540 aaPredicted RBP21.04■□□□□ 0.96
TRIM58-201ENST00000366481 CPNE8Q86YQ8 564 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 SLC20A1Q8WUM9 679 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 TMEM237Q96Q45 408 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 THAP2Q9H0W7 228 aa21.04■□□□□ 0.96
TRIM58-201ENST00000366481 MYO3BQ8WXR4 1341 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 ARP10275 920 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 SREBF1P36956 1147 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 TNIP1Q15025 636 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 PPP4R3CPQ6ZMV5 832 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 FAM178BQ8IXR5 827 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 PRMT6Q96LA8 375 aaPredicted RBP21.03■□□□□ 0.96
TRIM58-201ENST00000366481 NUDCD1Q96RS6 583 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 NKIRAS1Q9NYS0 192 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 CTTNBP2NLQ9P2B4 639 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 RPL21P46778 160 aaKnown RBP21.03■□□□□ 0.96
TRIM58-201ENST00000366481 BNIP1Q12981 228 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 MAPK7Q13164 816 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 AOC3Q16853 763 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 ARMC3Q5W041 872 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 ARHGAP27Q6ZUM4 889 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 EXOC3L1Q86VI1 746 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 DCAF4Q8WV16 495 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 TEKT4Q8WW24 435 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 CRYGNQ8WXF5 182 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 RMDN2Q96LZ7 410 aa21.03■□□□□ 0.96
TRIM58-201ENST00000366481 EXOC3O60645 756 aa21.02■□□□□ 0.96
TRIM58-201ENST00000366481 BRAFP15056 766 aa21.02■□□□□ 0.96
TRIM58-201ENST00000366481 INHBEP58166 350 aa21.02■□□□□ 0.96
TRIM58-201ENST00000366481 AP3B2Q13367 1082 aa21.02■□□□□ 0.96
TRIM58-201ENST00000366481 AUHQ13825 339 aaKnown RBP21.02■□□□□ 0.96
TRIM58-201ENST00000366481 NYAP2Q9P242 653 aa21.02■□□□□ 0.96
TRIM58-201ENST00000366481 ZMYND8Q9ULU4 1186 aaPredicted RBP21.02■□□□□ 0.96
TRIM58-201ENST00000366481 GAS7O60861 476 aa21.02■□□□□ 0.96
TRIM58-201ENST00000366481 GH1P01241 217 aa21.02■□□□□ 0.96
TRIM58-201ENST00000366481 ADRA2BP18089 450 aa21.02■□□□□ 0.96
TRIM58-201ENST00000366481 VPS41P49754 854 aa21.02■□□□□ 0.96
TRIM58-201ENST00000366481 TMEM154Q6P9G4 183 aa21.02■□□□□ 0.96
TRIM58-201ENST00000366481 CROCCP2Q86T23 111 aa21.02■□□□□ 0.96
TRIM58-201ENST00000366481 RASGEF1CQ8N431 466 aa21.02■□□□□ 0.96
TRIM58-201ENST00000366481 KAT5Q92993 513 aa21.02■□□□□ 0.96
TRIM58-201ENST00000366481 CTNNAL1Q9UBT7 734 aa21.02■□□□□ 0.96
TRIM58-201ENST00000366481 NKX1-2Q9UD57 310 aaPredicted RBP21.02■□□□□ 0.96
TRIM58-201ENST00000366481 KIAA0391O15091 583 aaKnown RBP21.02■□□□□ 0.95
TRIM58-201ENST00000366481 TNFAIP3P21580 790 aa21.02■□□□□ 0.95
TRIM58-201ENST00000366481 TARSP26639 723 aaKnown RBP21.02■□□□□ 0.95
TRIM58-201ENST00000366481 MARCKSL1P49006 195 aa21.02■□□□□ 0.95
TRIM58-201ENST00000366481 EPB41L4BQ9H329 900 aa21.02■□□□□ 0.95
TRIM58-201ENST00000366481 ZDHHC18Q9NUE0 388 aa21.02■□□□□ 0.95
TRIM58-201ENST00000366481 KLHL33A6NCF5 533 aa21.01■□□□□ 0.95
TRIM58-201ENST00000366481 CALCAP01258 141 aa21.01■□□□□ 0.95
TRIM58-201ENST00000366481 TSNAXIP1Q2TAA8 658 aa21.01■□□□□ 0.95
TRIM58-201ENST00000366481 RBM26Q5T8P6 1007 aaKnown RBP21.01■□□□□ 0.95
TRIM58-201ENST00000366481 CCDC137Q6PK04 289 aaKnown RBP21.01■□□□□ 0.95
TRIM58-201ENST00000366481 HES6Q96HZ4 224 aa21.01■□□□□ 0.95
TRIM58-201ENST00000366481 PITPNM3Q9BZ71 974 aa21.01■□□□□ 0.95
TRIM58-201ENST00000366481 RXFP1Q9HBX9 757 aa21.01■□□□□ 0.95
TRIM58-201ENST00000366481 DLGAP2Q9P1A6 1054 aa21.01■□□□□ 0.95
TRIM58-201ENST00000366481 GOLGA8IPA6NC78 632 aa21.01■□□□□ 0.95
TRIM58-201ENST00000366481 FAM187AA6NFU0 413 aa21.01■□□□□ 0.95
TRIM58-201ENST00000366481 GOLGA8JA6NMD2 632 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms