RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 NEDD4P46934 1319 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 M0R3G1 203 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 TBC1D4O60343 1298 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 SLC16A2P36021 539 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 TNFAIP1Q13829 316 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 JAMLQ86YT9 394 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 ELOA2Q8IYF1 753 aaPredicted RBP13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 C7orf31Q8N865 590 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 PRPF18Q99633 342 aaKnown RBP13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 ERP44Q9BS26 406 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 BTG4Q9NY30 223 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 POTEMA6NI47 508 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 HLA-DPA1P20036 260 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 HSD17B3P37058 310 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 SERPINB9P50453 376 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 RCN1Q15293 331 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 SYDE2Q5VT97 1194 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 PPP1R18Q6NYC8 613 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 NLRP10Q86W26 655 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 ADSSL1Q8N142 457 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.44□□□□□ -0.264e-7■□□□□ 10
SYNCRIP-201ENST00000355238 LEMD3Q9Y2U8 911 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 UBXN2AP68543 259 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 HORMAD1Q86X24 394 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 LRRC34Q8IZ02 419 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 BFARQ9NZS9 450 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 CHMP2BQ9UQN3 213 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 DPYDQ12882 1025 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 HEATR6Q6AI08 1181 aaKnown RBP13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 RCSD1Q6JBY9 416 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 MAGEB5Q9BZ81 275 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 UVRAGQ9P2Y5 699 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 SLC9A2Q9UBY0 812 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 ZHX2Q9Y6X8 837 aa13.44□□□□□ -0.26
SYNCRIP-201ENST00000355238 PYGLP06737 847 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 BMP3P12645 472 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 OSBPP22059 807 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 CDC27P30260 824 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 NAB2Q15742 525 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 MTHFD1LQ6UB35 978 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 SGMS1Q86VZ5 419 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 TERB1Q8NA31 727 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 CDC26Q8NHZ8 85 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 GYPCP04921 128 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 KRT16P08779 473 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 WLSQ5T9L3 541 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 ANGPTL8Q6UXH0 198 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 FRA10AC1Q70Z53 315 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 KRT27Q7Z3Y8 459 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 CNBD2Q96M20 576 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 POLD4Q9HCU8 107 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 UBE4BO95155 1302 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 CDK12Q9NYV4 1490 aaPredicted RBP13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 SORBS3O60504 671 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 ATP6V1G2O95670 118 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 ZNF667Q5HYK9 610 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 SCARA5Q6ZMJ2 495 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 TRAPPC11Q7Z392 1133 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 TYW5A2RUC4 315 aaKnown RBP13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 ANGPT2O15123 496 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 SPAG6O75602 509 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 PEX3P56589 373 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 CYFIP1Q7L576 1253 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 SLC35G2Q8TBE7 412 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 SERPINB13Q9UIV8 391 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 ZNF608Q9ULD9 1512 aaPredicted RBP13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 SFI1A8K8P3 1242 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 PSAPP07602 524 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 TRAF7Q6Q0C0 670 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 PRUNE1Q86TP1 453 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 RPF1Q9H9Y2 349 aaKnown RBP13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 PARVAQ9NVD7 372 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 TMEM51Q9NW97 253 aa13.43□□□□□ -0.26
SYNCRIP-201ENST00000355238 SMAPO00193 183 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 SLC16A3O15427 465 aaKnown RBP13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 ERFP50548 548 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 KRR1Q13601 381 aaKnown RBP13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 ALX1Q15699 326 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 CCDC85BQ15834 202 aaPredicted RBP13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 TMEM270Q6UE05 265 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 C4orf33Q8N1A6 199 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 PRPF38AQ8NAV1 312 aaKnown RBP13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 CASP10Q92851 521 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 CLMNQ96JQ2 1002 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 FAM20AQ96MK3 541 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 APOL6Q9BWW8 343 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 ORC4O43929 436 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 NUP107P57740 925 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 POU5F1BQ06416 359 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 IMPG1Q17R60 797 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 ZNF746Q6NUN9 644 aaPredicted RBP13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 BARGINQ6ZT62 677 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 RCOR2Q8IZ40 523 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 CYGBQ8WWM9 190 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 TMBIM4Q9HC24 238 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 DTNAQ9Y4J8 743 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 GOLGA8RI6L899 631 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 K7ERI5 159 aa13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 XPO1O14980 1071 aaKnown RBP13.42□□□□□ -0.26
SYNCRIP-201ENST00000355238 ENO3P13929 434 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms