RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 DHX38Q92620 1227 aaKnown RBP11.59□□□□□ -0.55
CLCN6-202ENST00000346436 ZNF653Q96CK0 615 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 RSRC1Q96IZ7 334 aaKnown RBP11.59□□□□□ -0.55
CLCN6-202ENST00000346436 RBM12Q9NTZ6 932 aaKnown RBP11.59□□□□□ -0.55
CLCN6-202ENST00000346436 TJP2Q9UDY2 1190 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 LRRIQ3A6PVS8 624 aaPredicted RBP11.59□□□□□ -0.55
CLCN6-202ENST00000346436 EVI5O60447 810 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 MAP2K2P36507 400 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 MKRN4PQ13434 485 aaPredicted RBP11.59□□□□□ -0.55
CLCN6-202ENST00000346436 SEC23AQ15436 765 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 MEI1Q5TIA1 1274 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 ZNF746Q6NUN9 644 aaPredicted RBP11.59□□□□□ -0.55
CLCN6-202ENST00000346436 CCSER1Q9C0I3 900 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 INTS9Q9NV88 658 aaKnown RBP11.59□□□□□ -0.55
CLCN6-202ENST00000346436 ERAP1Q9NZ08 941 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 PVALEFA0A1B0GWK0 134 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 FGFR2P21802 821 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 APBA1Q02410 837 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 ZNF699Q32M78 642 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 PPP4R3CPQ6ZMV5 832 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 SCYL1Q96KG9 808 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 RUNDC3BQ96NL0 473 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 NYAP2Q9P242 653 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 ZNF212Q9UDV6 495 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 TMEM88BA6NKF7 163 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 MAFGO15525 162 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 RPSAP08865 295 aaKnown RBP11.59□□□□□ -0.55
CLCN6-202ENST00000346436 PMLP29590 882 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 SOX5P35711 763 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 FKBP1BP68106 108 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 BEND6Q5SZJ8 279 aaPredicted RBP11.59□□□□□ -0.55
CLCN6-202ENST00000346436 CCDC13Q8IYE1 715 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 TMEM199Q8N511 208 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 LACRTQ9GZZ8 138 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 DNAJC12Q9UKB3 198 aa11.59□□□□□ -0.55
CLCN6-202ENST00000346436 GOLGA8SH3BPF8 625 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 DDNO94850 711 aaPredicted RBP11.58□□□□□ -0.56
CLCN6-202ENST00000346436 NR3C1P04150 777 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 DR1Q01658 176 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 C3orf67Q6ZVT6 689 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 ZNF467Q7Z7K2 595 aaPredicted RBP11.58□□□□□ -0.56
CLCN6-202ENST00000346436 TXNRD3Q86VQ6 643 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 GUF1Q8N442 669 aaKnown RBP11.58□□□□□ -0.56
CLCN6-202ENST00000346436 SHCBP1Q8NEM2 672 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 TIPINQ9BVW5 301 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 ANKZF1Q9H8Y5 726 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 KRT14P02533 472 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 EVX2Q03828 476 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 HHATQ5VTY9 493 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 OR2W6PQ8NHA6 318 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 NEDD1Q8NHV4 660 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 PBKQ96KB5 322 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 BAG5Q9UL15 447 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 ZC3H4Q9UPT8 1303 aaKnown RBP11.58□□□□□ -0.56
CLCN6-202ENST00000346436 CLGNO14967 610 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 MAGEA9P43362 315 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 WASHC5Q12768 1159 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 QRICH1Q2TAL8 776 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 CCNI2Q6ZMN8 369 aaPredicted RBP11.58□□□□□ -0.56
CLCN6-202ENST00000346436 SRLQ86TD4 932 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 DNAAF5Q86Y56 855 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 DNAAF3Q8N9W5 541 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 BANK1Q8NDB2 785 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 WHAMMQ8TF30 809 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.58□□□□□ -0.565e-7■■■□□ 15.8
CLCN6-202ENST00000346436 MAD2L2Q9UI95 211 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 MCF2LO15068 1137 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 CABYRO75952 493 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 CD4P01730 458 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 TRIM49P0CI25 452 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 TRIM49CP0CI26 452 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 CD58P19256 250 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 RASA1P20936 1047 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 ATP11AP98196 1134 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 XKR3Q5GH77 459 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 IRAK1BP1Q5VVH5 260 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 ARHGEF18Q6ZSZ5 1173 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 MYLK4Q86YV6 388 aaPredicted RBP11.58□□□□□ -0.56
CLCN6-202ENST00000346436 FMO2Q99518 471 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 SH2D3AQ9BRG2 576 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 SLC13A4Q9UKG4 626 aa11.58□□□□□ -0.56
CLCN6-202ENST00000346436 NWD1Q149M9 1564 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 HBP1O60381 514 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 KRT3P12035 628 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 CYP4F22Q6NT55 531 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 PADI6Q6TGC4 694 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 THOC1Q96FV9 657 aaKnown RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 MAGEB5Q9BZ81 275 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 MLXIPLQ9NP71 852 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 TYW1Q9NV66 732 aaKnown RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 PDS5AQ29RF7 1337 aaKnown RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 C3P01024 1663 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 EIF4E1BA6NMX2 242 aaKnown RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 NOL3O60936 208 aaKnown RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 HERVK_113P62684 666 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 NKX1-1Q15270 411 aaPredicted RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 ARMC6Q6NXE6 501 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 INTS5Q6P9B9 1019 aaKnown RBP11.57□□□□□ -0.56
CLCN6-202ENST00000346436 HDAC11Q96DB2 347 aa11.57□□□□□ -0.56
CLCN6-202ENST00000346436 KIF12Q96FN5 646 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms