RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 VTNP04004 478 aa11.4□□□□□ -0.58
TPM3-207ENST00000341372 XRCC6P12956 609 aaKnown RBP eCLIP11.4□□□□□ -0.589e-13■□□□□ 8.6
TPM3-207ENST00000341372 GPC3P51654 580 aa11.4□□□□□ -0.58
TPM3-207ENST00000341372 CRYBB1P53674 252 aaPredicted RBP11.4□□□□□ -0.58
TPM3-207ENST00000341372 NPEPPSP55786 919 aa11.4□□□□□ -0.58
TPM3-207ENST00000341372 DRP2Q13474 957 aa11.4□□□□□ -0.58
TPM3-207ENST00000341372 IL17AQ16552 155 aa11.4□□□□□ -0.58
TPM3-207ENST00000341372 ARL6IP4Q66PJ3 421 aaKnown RBP11.4□□□□□ -0.58
TPM3-207ENST00000341372 HAUS3Q68CZ6 603 aa11.4□□□□□ -0.58
TPM3-207ENST00000341372 HERC6Q8IVU3 1022 aa11.4□□□□□ -0.58
TPM3-207ENST00000341372 ERMNQ8TAM6 284 aa11.4□□□□□ -0.58
TPM3-207ENST00000341372 CEP170P1Q96L14 293 aa11.4□□□□□ -0.58
TPM3-207ENST00000341372 SH2D3AQ9BRG2 576 aa11.4□□□□□ -0.58
TPM3-207ENST00000341372 ERVK-5Q9HDB9 667 aa11.4□□□□□ -0.58
TPM3-207ENST00000341372 CHD9Q3L8U1 2897 aa11.4□□□□□ -0.58
TPM3-207ENST00000341372 STX6O43752 255 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 BMP15O95972 392 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 CD52P31358 61 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 NOS2P35228 1153 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 PBX2P40425 430 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 RARRES1P49788 294 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 CDC42EP1Q00587 391 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 BECN1Q14457 450 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 KIZQ2M2Z5 673 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 C11orf96Q7Z7L8 435 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 CELF2-AS1Q8N7Q2 184 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 LINC01599Q8WXQ3 324 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 TIFAQ96CG3 184 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 FTHL17Q9BXU8 183 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 RAB34Q9BZG1 259 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 DBR1Q9UK59 544 aaKnown RBP11.4□□□□□ -0.59
TPM3-207ENST00000341372 AKT3Q9Y243 479 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 YBX2Q9Y2T7 364 aaKnown RBP11.4□□□□□ -0.59
TPM3-207ENST00000341372 MSRB2Q9Y3D2 182 aa11.4□□□□□ -0.59
TPM3-207ENST00000341372 GJB5O95377 273 aa11.39□□□□□ -0.59
TPM3-207ENST00000341372 NLRP11P59045 1033 aaKnown RBP11.39□□□□□ -0.59
TPM3-207ENST00000341372 AGERQ15109 404 aa11.39□□□□□ -0.59
TPM3-207ENST00000341372 XKR9Q5GH70 373 aa11.39□□□□□ -0.59
TPM3-207ENST00000341372 ZNF697Q5TEC3 545 aa11.39□□□□□ -0.59
TPM3-207ENST00000341372 DTHD1Q6ZMT9 781 aa11.39□□□□□ -0.59
TPM3-207ENST00000341372 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.39□□□□□ -0.592e-6■■□□□ 14.5
TPM3-207ENST00000341372 SLC7A3Q8WY07 619 aa11.39□□□□□ -0.59
TPM3-207ENST00000341372 EAF1Q96JC9 268 aaPredicted RBP11.39□□□□□ -0.59
TPM3-207ENST00000341372 OSMRQ99650 979 aa11.39□□□□□ -0.59
TPM3-207ENST00000341372 TTYH1Q9H313 450 aaPredicted RBP11.39□□□□□ -0.59
TPM3-207ENST00000341372 SUGCTQ9HAC7 445 aa11.39□□□□□ -0.59
TPM3-207ENST00000341372 ETNK1Q9HBU6 452 aa11.39□□□□□ -0.59
TPM3-207ENST00000341372 XPNPEP1Q9NQW7 623 aa11.39□□□□□ -0.59
TPM3-207ENST00000341372 FAM8A1Q9UBU6 413 aa11.39□□□□□ -0.59
TPM3-207ENST00000341372 LRWD1Q9UFC0 647 aa11.39□□□□□ -0.59
TPM3-207ENST00000341372 PADI3Q9ULW8 664 aa11.39□□□□□ -0.59
TPM3-207ENST00000341372 MORC2Q9Y6X9 1032 aaPredicted RBP11.39□□□□□ -0.59
TPM3-207ENST00000341372 CPNE3O75131 537 aaKnown RBP11.38□□□□□ -0.59
TPM3-207ENST00000341372 DGAT1O75907 488 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 AMHP03971 560 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 DDIT3P35638 169 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 DNM2P50570 870 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 RABGGTBP53611 331 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 POLGP54098 1239 aaPredicted RBP11.38□□□□□ -0.59
TPM3-207ENST00000341372 EMC2Q15006 297 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 POTEGQ6S5H5 508 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 ZNF410Q86VK4 478 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 FAM228AQ86W67 206 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 WDR75Q8IWA0 830 aaKnown RBP11.38□□□□□ -0.59
TPM3-207ENST00000341372 ANP32EQ9BTT0 268 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 SCHIP1Q9P0W5 487 aaPredicted RBP11.38□□□□□ -0.59
TPM3-207ENST00000341372 MSRAQ9UJ68 235 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 NOC2LQ9Y3T9 749 aaKnown RBP11.38□□□□□ -0.59
TPM3-207ENST00000341372 RPS6KA5O75582 802 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 DARSP14868 501 aaKnown RBP11.38□□□□□ -0.59
TPM3-207ENST00000341372 GNALP38405 381 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 HTRA4P83105 476 aaPredicted RBP11.38□□□□□ -0.59
TPM3-207ENST00000341372 HYIQ5T013 277 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 ZFYVE27Q5T4F4 411 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 Q7L0L9 218 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 BPHLQ86WA6 291 aaPredicted RBP11.38□□□□□ -0.59
TPM3-207ENST00000341372 CRIPAKQ8N1N5 446 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 TOP1MTQ969P6 601 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 ANAPC16Q96DE5 110 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 NACC1Q96RE7 527 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 MTRQ99707 1265 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 MMTAG2Q9BU76 263 aaKnown RBP11.38□□□□□ -0.59
TPM3-207ENST00000341372 ZSCAN16Q9H4T2 348 aaPredicted RBP11.38□□□□□ -0.59
TPM3-207ENST00000341372 MTMR10Q9NXD2 777 aa11.38□□□□□ -0.59
TPM3-207ENST00000341372 SUCLA2Q9P2R7 463 aaPredicted RBP11.38□□□□□ -0.59
TPM3-207ENST00000341372 SOX9P48436 509 aa11.37□□□□□ -0.59
TPM3-207ENST00000341372 PTPAQ15257 358 aa11.37□□□□□ -0.59
TPM3-207ENST00000341372 DEFB123Q8N688 67 aa11.37□□□□□ -0.59
TPM3-207ENST00000341372 SP7Q8TDD2 431 aaPredicted RBP11.37□□□□□ -0.59
TPM3-207ENST00000341372 SNX29Q8TEQ0 813 aa11.37□□□□□ -0.59
TPM3-207ENST00000341372 PIGOQ8TEQ8 1089 aa11.37□□□□□ -0.59
TPM3-207ENST00000341372 TCP11Q8WWU5 503 aa11.37□□□□□ -0.59
TPM3-207ENST00000341372 PSPC1Q8WXF1 523 aaKnown RBP11.37□□□□□ -0.59
TPM3-207ENST00000341372 AK8Q96MA6 479 aa11.37□□□□□ -0.59
TPM3-207ENST00000341372 PPP1R16BQ96T49 567 aa11.37□□□□□ -0.59
TPM3-207ENST00000341372 NKX2-4Q9H2Z4 354 aa11.37□□□□□ -0.59
TPM3-207ENST00000341372 SEMA6BQ9H3T3 888 aa11.37□□□□□ -0.59
TPM3-207ENST00000341372 RC3H2Q9HBD1 1191 aaKnown RBP11.37□□□□□ -0.59
TPM3-207ENST00000341372 ATP6V0A4Q9HBG4 840 aa11.37□□□□□ -0.59
TPM3-207ENST00000341372 ST3GAL5Q9UNP4 418 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms