RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 FAM169AQ9Y6X4 670 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 DOCK5Q9H7D0 1870 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 ZNF233A6NK53 670 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 FGGP02679 453 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 ATP1A2P50993 1020 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 ACTR2P61160 394 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 TAS1R3Q7RTX0 852 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 MREGQ8N565 214 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 HELQQ8TDG4 1101 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 TAS1R2Q8TE23 839 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 HVCN1Q96D96 273 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 KLRG1Q96E93 195 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 FBXL18Q96ME1 805 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 NEUROG2Q9H2A3 272 aa21.68■■□□□ 1.06
SPG7-202ENST00000341316 LTBP3Q9NS15 1303 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 CCDC188H7C350 402 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 PSAPP07602 524 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 SP2Q02086 613 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 PRKCEQ02156 737 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 FSTL1Q12841 308 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 ZNF211Q13398 564 aaPredicted RBP21.67■■□□□ 1.06
SPG7-202ENST00000341316 NAA35Q5VZE5 725 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 KRT39Q6A163 491 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 ABHD15Q6UXT9 468 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 SHC3Q92529 594 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 MFSD14AQ96MC6 490 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 TEX13BQ9BXU2 312 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 SLC9A2Q9UBY0 812 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 SEPT9Q9UHD8 586 aaPredicted RBP21.67■■□□□ 1.06
SPG7-202ENST00000341316 TTC7AQ9ULT0 858 aaPredicted RBP21.67■■□□□ 1.06
SPG7-202ENST00000341316 COQ4Q9Y3A0 265 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 KIAA1217Q5T5P2 1943 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 PEX10O60683 326 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 CPP00450 1065 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 PRPF4BQ13523 1007 aaKnown RBP21.67■■□□□ 1.06
SPG7-202ENST00000341316 WHAMMQ8TF30 809 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 POMGNT1Q8WZA1 660 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 VTI1AQ96AJ9 217 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 CELF4Q9BZC1 486 aaKnown RBP21.67■■□□□ 1.06
SPG7-202ENST00000341316 MTFR1LQ9H019 292 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 TMEM8AQ9HCN3 771 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 ALG6Q9Y672 507 aa21.67■■□□□ 1.06
SPG7-202ENST00000341316 SSC5DA1L4H1 1573 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 WDR81Q562E7 1941 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 SPATA31C2B4DYI2 1134 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 C19orf81C9J6K1 198 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 ATP2A1O14983 1001 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 MMEP08473 750 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 CYP24A1Q07973 514 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 ADAT2Q7Z6V5 191 aaKnown RBP21.66■■□□□ 1.06
SPG7-202ENST00000341316 MICALL1Q8N3F8 863 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 ZNF526Q8TF50 670 aaPredicted RBP21.66■■□□□ 1.06
SPG7-202ENST00000341316 RNPC3Q96LT9 517 aaKnown RBP21.66■■□□□ 1.06
SPG7-202ENST00000341316 ACAD9Q9H845 621 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 CYP26B1Q9NR63 512 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 TMOD4Q9NZQ9 345 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 CTTNBP2NLQ9P2B4 639 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 SPDYE16A6NNV3 312 aaPredicted RBP21.66■■□□□ 1.06
SPG7-202ENST00000341316 TTI1O43156 1089 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 ATMINO43313 823 aaPredicted RBP21.66■■□□□ 1.06
SPG7-202ENST00000341316 DGAT1O75907 488 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 HADHBP55084 474 aaKnown RBP21.66■■□□□ 1.06
SPG7-202ENST00000341316 FMO1Q01740 532 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 POU5F1Q01860 360 aaKnown RBP21.66■■□□□ 1.06
SPG7-202ENST00000341316 PRKG1Q13976 671 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 HLTFQ14527 1009 aaKnown RBP eCLIP21.66■■□□□ 1.064e-7■■■■□ 26
SPG7-202ENST00000341316 AADACL2Q6P093 401 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 DLK2Q6UY11 383 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 RHOT2Q8IXI1 618 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 DHX38Q92620 1227 aaKnown RBP21.66■■□□□ 1.06
SPG7-202ENST00000341316 C17orf75Q9HAS0 396 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 GGA3Q9NZ52 723 aa21.66■■□□□ 1.06
SPG7-202ENST00000341316 NFASCO94856 1347 aa21.65■■□□□ 1.06
SPG7-202ENST00000341316 COPB2P35606 906 aa21.65■■□□□ 1.06
SPG7-202ENST00000341316 GPC3P51654 580 aa21.65■■□□□ 1.06
SPG7-202ENST00000341316 GPC5P78333 572 aa21.65■■□□□ 1.06
SPG7-202ENST00000341316 SV2AQ7L0J3 742 aa21.65■■□□□ 1.06
SPG7-202ENST00000341316 APOBEC3FQ8IUX4 373 aaKnown RBP21.65■■□□□ 1.06
SPG7-202ENST00000341316 TATDN2Q93075 761 aa21.65■■□□□ 1.06
SPG7-202ENST00000341316 ARID2Q68CP9 1835 aa21.64■■□□□ 1.06
SPG7-202ENST00000341316 HNRNPDLO14979 420 aaKnown RBP21.64■■□□□ 1.06
SPG7-202ENST00000341316 RTN2O75298 545 aa21.64■■□□□ 1.06
SPG7-202ENST00000341316 DLATP10515 647 aaKnown RBP21.64■■□□□ 1.06
SPG7-202ENST00000341316 MARCKSL1P49006 195 aa21.64■■□□□ 1.06
SPG7-202ENST00000341316 MFAP3P55082 362 aa21.64■■□□□ 1.06
SPG7-202ENST00000341316 TMC2Q8TDI7 906 aa21.64■■□□□ 1.06
SPG7-202ENST00000341316 KRT35Q92764 455 aa21.64■■□□□ 1.06
SPG7-202ENST00000341316 POLR3FQ9H1D9 316 aaPredicted RBP21.64■■□□□ 1.06
SPG7-202ENST00000341316 CARD9Q9H257 536 aa21.64■■□□□ 1.06
SPG7-202ENST00000341316 SLITRK6Q9H5Y7 841 aa21.64■■□□□ 1.06
SPG7-202ENST00000341316 ERVK-5Q9HDB9 667 aa21.64■■□□□ 1.06
SPG7-202ENST00000341316 RAB20Q9NX57 234 aa21.64■■□□□ 1.06
SPG7-202ENST00000341316 AFG3L2Q9Y4W6 797 aa21.64■■□□□ 1.06
SPG7-202ENST00000341316 CALCAP01258 141 aa21.64■■□□□ 1.05
SPG7-202ENST00000341316 ATP4AP20648 1035 aa21.64■■□□□ 1.05
SPG7-202ENST00000341316 HSPA9P38646 679 aaKnown RBP21.64■■□□□ 1.05
SPG7-202ENST00000341316 LIG3P49916 1009 aa21.64■■□□□ 1.05
SPG7-202ENST00000341316 HIRAP54198 1017 aaPredicted RBP21.64■■□□□ 1.05
SPG7-202ENST00000341316 CUL1Q13616 776 aa21.64■■□□□ 1.05
SPG7-202ENST00000341316 TCEAL1Q15170 157 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms