RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 C9orf72Q96LT7 481 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 VIPAS39Q9H9C1 493 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 HERC5Q9UII4 1024 aaKnown RBP13.24□□□□□ -0.29
OTOF-203ENST00000339598 RTN2O75298 545 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 MDH1P40925 334 aaKnown RBP13.24□□□□□ -0.29
OTOF-203ENST00000339598 ALKBH8Q96BT7 664 aaKnown RBP13.24□□□□□ -0.29
OTOF-203ENST00000339598 TRIM51Q9BSJ1 452 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 CYP4F11Q9HBI6 524 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 ALG13Q9NP73 1137 aaKnown RBP13.24□□□□□ -0.29
OTOF-203ENST00000339598 PARVAQ9NVD7 372 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 SMARCAL1Q9NZC9 954 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 MEFVO15553 781 aaPredicted RBP13.24□□□□□ -0.29
OTOF-203ENST00000339598 SLC9A1P19634 815 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 ACTR2P61160 394 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 WDR72Q3MJ13 1102 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 SLC35G2Q8TBE7 412 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 GIPC2Q8TF65 315 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.24□□□□□ -0.29
OTOF-203ENST00000339598 CCT8L2Q96SF2 557 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 APEX2Q9UBZ4 518 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.24□□□□□ -0.29
OTOF-203ENST00000339598 A0A0G2JLW4 131 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 ROR1Q01973 937 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 GRIN1Q05586 938 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 STAT4Q14765 748 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 HIF1AQ16665 826 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 SBK1Q52WX2 424 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 SMIM5Q71RC9 77 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 GRAMD1AQ96CP6 724 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 RMDN2Q96LZ7 410 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 REEP2Q9BRK0 252 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 CENPKQ9BS16 269 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 RBM12Q9NTZ6 932 aaKnown RBP13.24□□□□□ -0.29
OTOF-203ENST00000339598 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.24□□□□□ -0.29
OTOF-203ENST00000339598 PIM2Q9P1W9 311 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 GGT7Q9UJ14 662 aa13.24□□□□□ -0.29
OTOF-203ENST00000339598 TCP11X1B4DZS4 312 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 NDUFB10O96000 172 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 CIITAP33076 1130 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 ENGASEQ8NFI3 743 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 PDCD6IPQ8WUM4 868 aaKnown RBP13.23□□□□□ -0.29
OTOF-203ENST00000339598 EPB41L4AQ9HCS5 686 aaPredicted RBP13.23□□□□□ -0.29
OTOF-203ENST00000339598 TUFT1Q9NNX1 390 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 DAGLAQ9Y4D2 1042 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 CRB1P82279 1406 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 A2ML1A8K2U0 1454 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 USP31Q70CQ4 1352 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 RNF103-CHMP3A0A140T963 221 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 A8MXQ7 604 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 GOLGA8RI6L899 631 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 CSF1RP07333 972 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 PPARGP37231 505 aaPredicted RBP13.23□□□□□ -0.29
OTOF-203ENST00000339598 FMO5P49326 533 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 C1orf228Q6PIY5 440 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 OR6P1Q8NGX9 317 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 ACAD9Q9H845 621 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 DDX56Q9NY93 547 aaKnown RBP13.23□□□□□ -0.29
OTOF-203ENST00000339598 CFAP73A6NFT4 308 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 EIF4E1BA6NMX2 242 aaKnown RBP13.23□□□□□ -0.29
OTOF-203ENST00000339598 CDH16O75309 829 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 EEF1DP29692 281 aaKnown RBP13.23□□□□□ -0.29
OTOF-203ENST00000339598 YWHABP31946 246 aaKnown RBP13.23□□□□□ -0.29
OTOF-203ENST00000339598 RABGAP1LQ5R372 815 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 LRRC31Q6UY01 552 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 PID1Q7Z2X4 250 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 ZBTB18Q99592 522 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 ECT2Q9H8V3 914 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 FHOD1Q9Y613 1164 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 PLEKHG2Q9H7P9 1386 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 ATXN8OSP0DMR3 200 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 RNF149Q8NC42 400 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 YIPF3Q9GZM5 350 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 SENP1Q9P0U3 644 aa13.23□□□□□ -0.29
OTOF-203ENST00000339598 SUCLA2Q9P2R7 463 aaPredicted RBP13.23□□□□□ -0.29
OTOF-203ENST00000339598 BCORL1Q5H9F3 1711 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 HSPA9P38646 679 aaKnown RBP13.22□□□□□ -0.29
OTOF-203ENST00000339598 EDRF1Q3B7T1 1238 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 ANKMY2Q8IV38 441 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 PARP9Q8IXQ6 854 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 SIK2Q9H0K1 926 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 TRABDQ9H4I3 376 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 E2F6O75461 281 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 MYCP01106 439 aaPredicted RBP13.22□□□□□ -0.29
OTOF-203ENST00000339598 CYP2C19P33261 490 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 ACOT2P49753 483 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 RAD23BP54727 409 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 ZBTB41Q5SVQ8 909 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 RGS9BPQ6ZS82 235 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 SRLQ86TD4 932 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 RBM15Q96T37 977 aaKnown RBP eCLIP13.22□□□□□ -0.29
OTOF-203ENST00000339598 KLC4Q9NSK0 619 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 KLHL11Q9NVR0 708 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 ADA2Q9NZK5 511 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 HSPBP1Q9NZL4 362 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 UVRAGQ9P2Y5 699 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 TRIM33Q9UPN9 1127 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 L3MBTL1Q9Y468 752 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 FDX1P10109 184 aa13.22□□□□□ -0.29
OTOF-203ENST00000339598 CARSP49589 748 aaKnown RBP13.22□□□□□ -0.29
OTOF-203ENST00000339598 ERFP50548 548 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms