RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 SCAND2PQ9GZW5 306 aaPredicted RBP12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 GBP3Q9H0R5 595 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 NXF3Q9H4D5 531 aaKnown RBP12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 SEL1LQ9UBV2 794 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 STK39Q9UEW8 545 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 COG5Q9UP83 839 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 LZTS1Q9Y250 596 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 HES2Q9Y543 173 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 NLRC5Q86WI3 1866 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 PRRC2BQ5JSZ5 2229 aaKnown RBP12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 ARL5CA6NH57 179 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 MEIS3P2A8K0S8 358 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 K7ENM7 598 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 POMCP01189 267 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 MAPTP10636 758 aaKnown RBP12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 GAP43P17677 238 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 AKAP5P24588 427 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 ANP32AP39687 249 aaKnown RBP12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 MLH1P40692 756 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 MATR3P43243 847 aaKnown RBP eCLIP12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 ZNF131P52739 623 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 YARSP54577 528 aaKnown RBP12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 NCKAP1LP55160 1127 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 AAK1Q2M2I8 961 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 ZNF568Q3ZCX4 644 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 NT5DC1Q5TFE4 455 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 ZPBP2Q6X784 338 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 DYMQ7RTS9 669 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 HAUS6Q7Z4H7 955 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 TMEM161BQ8NDZ6 487 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 LRRC15Q8TF66 581 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 MRPS27Q92552 414 aaKnown RBP12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 DDX12PQ92771 950 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 CCDC94Q9BW85 323 aaPredicted RBP12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 TNMDQ9H2S6 317 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 NRDE2Q9H7Z3 1164 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 MAGEF1Q9HAY2 307 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 TLR9Q9NR96 1032 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 THEGQ9P2T0 379 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 PCDHA7Q9UN72 937 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 FAN1Q9Y2M0 1017 aa12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 ARIH1Q9Y4X5 557 aaPredicted RBP12.43□□□□□ -0.42
SLC28A1-202ENST00000338602 MYH15Q9Y2K3 1946 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 FSD2A1L4K1 749 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 INPPL1O15357 1258 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 MCF2P10911 925 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 IDEP14735 1019 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 SHC4Q6S5L8 630 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 MPZL3Q6UWV2 235 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 CCDC65Q8IXS2 484 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 SLC39A11Q8N1S5 342 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 ATXN2LQ8WWM7 1075 aaKnown RBP12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 KCNN1Q92952 543 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 HLA-CQ95604 372 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 DHX58Q96C10 678 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 TARS2Q9BW92 718 aaKnown RBP12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 RNF39Q9H2S5 420 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 NGRNQ9NPE2 291 aaKnown RBP12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 TOPORSQ9NS56 1045 aaPredicted RBP12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 SNTG2Q9NY99 539 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 HCSTQ9UBK5 93 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 ZDHHC9Q9Y397 364 aa12.42□□□□□ -0.42
SLC28A1-202ENST00000338602 CHD7Q9P2D1 2997 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 COL4A4P53420 1690 aaPredicted RBP12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 MYMKA6NI61 221 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 TTLL13PA6NNM8 815 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 CLDN3O15551 220 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 TOM1L1O75674 476 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 CSPG5O95196 566 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 GALTP07902 379 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 OR1G1P47890 313 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 LIG4P49917 911 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 SCNN1GP51170 649 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 GRIK3Q13003 919 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 KYAT1Q16773 422 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 HERC4Q5GLZ8 1057 aaPredicted RBP12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 TCEAL5Q5H9L2 206 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 AXDND1Q5T1B0 1012 aaPredicted RBP12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 RESP18Q5W5W9 173 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 EEF1DP3Q658K8 133 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 TMC7Q7Z402 723 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 ZBTB33Q86T24 672 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 CEP57L1Q8IYX8 460 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 TMEM87AQ8NBN3 555 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 LEO1Q8WVC0 666 aaPredicted RBP12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 HVCN1Q96D96 273 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 SNX27Q96L92 541 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 ZFP42Q96MM3 310 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 COLEC11Q9BWP8 271 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 MRPL44Q9H9J2 332 aaKnown RBP12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 ENTPD7Q9NQZ7 604 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 KLK14Q9P0G3 267 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 TBX20Q9UMR3 447 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 USP20Q9Y2K6 914 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 GDAQ9Y2T3 454 aa12.41□□□□□ -0.42
SLC28A1-202ENST00000338602 BDP1A6H8Y1 2624 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 A0A087X0B3 334 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 NT5C1B-RDH14C9J2C7 533 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 HNRNPDLO14979 420 aaKnown RBP12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 POLR2DO15514 142 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms