RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 EXOC7Q9UPT5 735 aa8.82□□□□□ -1
HPS4-201ENST00000336873 F8VZ95 297 aa8.81□□□□□ -1
HPS4-201ENST00000336873 PPP2R2AP63151 447 aa8.81□□□□□ -1
HPS4-201ENST00000336873 BASP1P80723 227 aaKnown RBP8.81□□□□□ -1
HPS4-201ENST00000336873 MXRA7P84157 204 aa8.81□□□□□ -1
HPS4-201ENST00000336873 TMEM119Q4V9L6 283 aa8.81□□□□□ -1
HPS4-201ENST00000336873 HHIPL2Q6UWX4 724 aa8.81□□□□□ -1
HPS4-201ENST00000336873 PPP1R14CQ8TAE6 165 aa8.81□□□□□ -1
HPS4-201ENST00000336873 ARHGEF2Q92974 986 aaKnown RBP8.81□□□□□ -1
HPS4-201ENST00000336873 ZBTB45Q96K62 511 aaPredicted RBP8.81□□□□□ -1
HPS4-201ENST00000336873 IQCGQ9H095 443 aaKnown RBP8.81□□□□□ -1
HPS4-201ENST00000336873 CTNNAL1Q9UBT7 734 aa8.81□□□□□ -1
HPS4-201ENST00000336873 IGSF9BQ9UPX0 1349 aa8.81□□□□□ -1
HPS4-201ENST00000336873 TCRBV7S2A1N4TA0A589 114 aa8.81□□□□□ -1
HPS4-201ENST00000336873 CDC25CP30307 473 aa8.81□□□□□ -1
HPS4-201ENST00000336873 PEX19P40855 299 aa8.81□□□□□ -1
HPS4-201ENST00000336873 RWDD2BP57060 319 aa8.81□□□□□ -1
HPS4-201ENST00000336873 LACTBP83111 547 aaPredicted RBP8.81□□□□□ -1
HPS4-201ENST00000336873 RRP1BQ14684 758 aaKnown RBP8.81□□□□□ -1
HPS4-201ENST00000336873 BBS9Q3SYG4 887 aa8.81□□□□□ -1
HPS4-201ENST00000336873 KIAA1755Q5JYT7 1200 aa8.81□□□□□ -1
HPS4-201ENST00000336873 INTS8Q75QN2 995 aaKnown RBP8.81□□□□□ -1
HPS4-201ENST00000336873 PRPF38AQ8NAV1 312 aaKnown RBP8.81□□□□□ -1
HPS4-201ENST00000336873 AENQ8WTP8 325 aaKnown RBP8.81□□□□□ -1
HPS4-201ENST00000336873 CNKSR2Q8WXI2 1034 aa8.81□□□□□ -1
HPS4-201ENST00000336873 SLC7A3Q8WY07 619 aa8.81□□□□□ -1
HPS4-201ENST00000336873 TARS2Q9BW92 718 aaKnown RBP8.81□□□□□ -1
HPS4-201ENST00000336873 STK33Q9BYT3 514 aa8.81□□□□□ -1
HPS4-201ENST00000336873 PPP1R12CQ9BZL4 782 aa8.81□□□□□ -1
HPS4-201ENST00000336873 ERVK-5Q9HDB9 667 aa8.81□□□□□ -1
HPS4-201ENST00000336873 SAE1Q9UBE0 346 aaPredicted RBP8.81□□□□□ -1
HPS4-201ENST00000336873 PASKQ96RG2 1323 aa8.81□□□□□ -1
HPS4-201ENST00000336873 MYH6P13533 1939 aa8.81□□□□□ -1
HPS4-201ENST00000336873 TGFB1I1O43294 461 aa8.81□□□□□ -1
HPS4-201ENST00000336873 PYGMP11217 842 aa8.81□□□□□ -1
HPS4-201ENST00000336873 KCNA4P22459 653 aa8.81□□□□□ -1
HPS4-201ENST00000336873 KRT17Q04695 432 aa8.81□□□□□ -1
HPS4-201ENST00000336873 EDRF1Q3B7T1 1238 aa8.81□□□□□ -1
HPS4-201ENST00000336873 ATP13A4Q4VNC1 1196 aa8.81□□□□□ -1
HPS4-201ENST00000336873 MUM1L1Q5H9M0 696 aa8.81□□□□□ -1
HPS4-201ENST00000336873 IRF2BP2Q7Z5L9 587 aa8.81□□□□□ -1
HPS4-201ENST00000336873 DDX23Q9BUQ8 820 aaKnown RBP8.81□□□□□ -1
HPS4-201ENST00000336873 KCTD10Q9H3F6 313 aa8.81□□□□□ -1
HPS4-201ENST00000336873 FAM114A2Q9NRY5 505 aa8.81□□□□□ -1
HPS4-201ENST00000336873 WRAP73Q9P2S5 460 aaPredicted RBP8.81□□□□□ -1
HPS4-201ENST00000336873 CLEC11AQ9Y240 323 aa8.81□□□□□ -1
HPS4-201ENST00000336873 CHD4Q14839 1912 aa8.8□□□□□ -1
HPS4-201ENST00000336873 E2F8A0AVK6 867 aa8.8□□□□□ -1
HPS4-201ENST00000336873 SAT1P21673 171 aa8.8□□□□□ -1
HPS4-201ENST00000336873 MAP2K2P36507 400 aa8.8□□□□□ -1
HPS4-201ENST00000336873 IFRD2Q12894 506 aaPredicted RBP8.8□□□□□ -1
HPS4-201ENST00000336873 ZC3H18Q86VM9 953 aaKnown RBP8.8□□□□□ -1
HPS4-201ENST00000336873 CCDC89Q8N998 374 aa8.8□□□□□ -1
HPS4-201ENST00000336873 LNX1Q8TBB1 728 aaPredicted RBP8.8□□□□□ -1
HPS4-201ENST00000336873 HSPH1Q92598 858 aa8.8□□□□□ -1
HPS4-201ENST00000336873 ALG3Q92685 438 aa8.8□□□□□ -1
HPS4-201ENST00000336873 MSTO1Q9BUK6 570 aa8.8□□□□□ -1
HPS4-201ENST00000336873 SAYSD1Q9NPB0 183 aa8.8□□□□□ -1
HPS4-201ENST00000336873 RNF14Q9UBS8 474 aa8.8□□□□□ -1
HPS4-201ENST00000336873 ASTN1O14525 1302 aa8.8□□□□□ -1
HPS4-201ENST00000336873 HMGB1P1B2RPK0 211 aaPredicted RBP8.8□□□□□ -1
HPS4-201ENST00000336873 TLR3O15455 904 aaKnown RBP8.8□□□□□ -1
HPS4-201ENST00000336873 TMEM191BP0C7N4 346 aa8.8□□□□□ -1
HPS4-201ENST00000336873 CHRM1P11229 460 aaPredicted RBP8.8□□□□□ -1
HPS4-201ENST00000336873 BRAFP15056 766 aa8.8□□□□□ -1
HPS4-201ENST00000336873 EZRP15311 586 aaKnown RBP8.8□□□□□ -1
HPS4-201ENST00000336873 RRM1P23921 792 aa8.8□□□□□ -1
HPS4-201ENST00000336873 FIGNQ5HY92 759 aa8.8□□□□□ -1
HPS4-201ENST00000336873 CYP4A22Q5TCH4 519 aa8.8□□□□□ -1
HPS4-201ENST00000336873 LIN9Q5TKA1 542 aa8.8□□□□□ -1
HPS4-201ENST00000336873 HHATQ5VTY9 493 aa8.8□□□□□ -1
HPS4-201ENST00000336873 MMS22LQ6ZRQ5 1243 aa8.8□□□□□ -1
HPS4-201ENST00000336873 RPAINQ86UA6 219 aa8.8□□□□□ -1
HPS4-201ENST00000336873 CCDC197Q8NCU1 140 aa8.8□□□□□ -1
HPS4-201ENST00000336873 MYCBPAPQ8TBZ2 947 aa8.8□□□□□ -1
HPS4-201ENST00000336873 SLC5A5Q92911 643 aa8.8□□□□□ -1
HPS4-201ENST00000336873 ZBTB10Q96DT7 871 aa8.8□□□□□ -1
HPS4-201ENST00000336873 MAK16Q9BXY0 300 aaKnown RBP8.8□□□□□ -1
HPS4-201ENST00000336873 VCPKMTQ9H867 229 aa8.8□□□□□ -1
HPS4-201ENST00000336873 FGFR1OP2Q9NVK5 253 aa8.8□□□□□ -1
HPS4-201ENST00000336873 TCP11X1B4DZS4 312 aa8.79□□□□□ -1
HPS4-201ENST00000336873 KRT1P04264 644 aa8.79□□□□□ -1
HPS4-201ENST00000336873 ITGB5P18084 799 aa8.79□□□□□ -1
HPS4-201ENST00000336873 CA4P22748 312 aa8.79□□□□□ -1
HPS4-201ENST00000336873 SREBF1P36956 1147 aa8.79□□□□□ -1
HPS4-201ENST00000336873 BIRC2Q13490 618 aa8.79□□□□□ -1
HPS4-201ENST00000336873 KRT39Q6A163 491 aa8.79□□□□□ -1
HPS4-201ENST00000336873 FAM43BQ6ZT52 329 aaPredicted RBP8.79□□□□□ -1
HPS4-201ENST00000336873 ZDHHC15Q96MV8 337 aa8.79□□□□□ -1
HPS4-201ENST00000336873 NSRP1Q9H0G5 558 aaKnown RBP8.79□□□□□ -1
HPS4-201ENST00000336873 TMEM206Q9H813 350 aa8.79□□□□□ -1
HPS4-201ENST00000336873 MAD1L1Q9Y6D9 718 aa8.79□□□□□ -1
HPS4-201ENST00000336873 EXOC1LA0A1B0GW35 172 aa8.79□□□□□ -1
HPS4-201ENST00000336873 RASA4BC9J798 803 aa8.79□□□□□ -1
HPS4-201ENST00000336873 ANKRD63C9JTQ0 380 aa8.79□□□□□ -1
HPS4-201ENST00000336873 RASA4O43374 803 aa8.79□□□□□ -1
HPS4-201ENST00000336873 MYBL1P10243 752 aa8.79□□□□□ -1
HPS4-201ENST00000336873 GABPAQ06546 454 aa8.79□□□□□ -1
HPS4-201ENST00000336873 TMEM62Q0P6H9 643 aa8.79□□□□□ -1
HPS4-201ENST00000336873 EPHA7Q15375 998 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms