RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 AGPAT1Q99943 283 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 TMEM39BQ9GZU3 492 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 WRAP73Q9P2S5 460 aaPredicted RBP12.95□□□□□ -0.34
NLRC3-201ENST00000324659 MTRF1LQ9UGC7 380 aaKnown RBP12.95□□□□□ -0.34
NLRC3-201ENST00000324659 INTUQ9ULD6 942 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 GOLGA8IPA6NC78 632 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 C5orf60A6NFR6 353 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 GOLGA8JA6NMD2 632 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 SLITRK3O94933 977 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 DLATP10515 647 aaKnown RBP12.95□□□□□ -0.34
NLRC3-201ENST00000324659 PYGMP11217 842 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 NPEPPSP55786 919 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 NBPF20Q3BBV1 942 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 SEL1L2Q5TEA6 688 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 HHIPL2Q6UWX4 724 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 UBL4BQ8N7F7 174 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 C1orf54Q8WWF1 131 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 SEC14L1Q92503 715 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 PRCCQ92733 491 aaPredicted RBP12.95□□□□□ -0.34
NLRC3-201ENST00000324659 BORCS6Q96GS4 357 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 WDR18Q9BV38 432 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 GLT8D2Q9H1C3 349 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 ADAM7Q9H2U9 754 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 GRHL1Q9NZI5 618 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 CTNNAL1Q9UBT7 734 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 GGA2Q9UJY4 613 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 NCANO14594 1321 aa12.95□□□□□ -0.34
NLRC3-201ENST00000324659 BHMG1C9JSJ3 638 aaPredicted RBP12.94□□□□□ -0.34
NLRC3-201ENST00000324659 K7ENM7 598 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 RASGRF2O14827 1237 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 GAS7O60861 476 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 PAEPP09466 180 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 SREBF1P36956 1147 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 ADCY2Q08462 1091 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 PRAMEF18Q5VWM3 479 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 FAM20AQ96MK3 541 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 FAM118BQ9BPY3 351 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 ARHGEF10LQ9HCE6 1279 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 TBK1Q9UHD2 729 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 G3BP2Q9UN86 482 aaKnown RBP12.94□□□□□ -0.34
NLRC3-201ENST00000324659 PHF2O75151 1096 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 SLC8A3P57103 927 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 BMT2Q1RMZ1 405 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 Q4G0T1 1027 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 STRIP1Q5VSL9 837 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 SEPT14Q6ZU15 432 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 TMEM179Q6ZVK1 233 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 PPM1KQ8N3J5 372 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 KIF2BQ8N4N8 673 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 AGAP11Q8TF27 550 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 ATXN2LQ8WWM7 1075 aaKnown RBP12.94□□□□□ -0.34
NLRC3-201ENST00000324659 ZNF317Q96PQ6 595 aaPredicted RBP12.94□□□□□ -0.34
NLRC3-201ENST00000324659 C15orf41Q9Y2V0 281 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 SMIM24O75264 130 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 ZBTB7AO95365 584 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 MYCLP12524 364 aaPredicted RBP12.94□□□□□ -0.34
NLRC3-201ENST00000324659 BFSP1Q12934 665 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 TNIP1Q15025 636 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 C11orf91Q3C1V1 193 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 PWWP2AQ96N64 755 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 MBOAT7Q96N66 472 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 TXLNGYQ9BZA5 131 aa12.94□□□□□ -0.34
NLRC3-201ENST00000324659 SRRM3A6NNA2 597 aaPredicted RBP12.93□□□□□ -0.34
NLRC3-201ENST00000324659 SNUPNO95149 360 aaKnown RBP12.93□□□□□ -0.34
NLRC3-201ENST00000324659 SGPL1O95470 568 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 ALAS1P13196 640 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 GAP43P17677 238 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 C1orf186Q6ZWK4 172 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 ZNF720Q7Z2F6 126 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 SIAH1Q8IUQ4 282 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 FAM84AQ96KN4 292 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 OLFML3Q9NRN5 406 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 FGFR1OP2Q9NVK5 253 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.93□□□□□ -0.34
NLRC3-201ENST00000324659 GTPBP10A4D1E9 387 aaKnown RBP12.93□□□□□ -0.34
NLRC3-201ENST00000324659 KLHL33A6NCF5 533 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 MMP13P45452 471 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 RWDD2BP57060 319 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 DHX34Q14147 1143 aaKnown RBP12.93□□□□□ -0.34
NLRC3-201ENST00000324659 DACT2Q5SW24 774 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 SH3BP5LQ7L8J4 393 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 ARMC9Q7Z3E5 817 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 CRYGNQ8WXF5 182 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 ATG4AQ8WYN0 398 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 CCDC127Q96BQ5 260 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 ZSWIM1Q9BR11 485 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 NOP53Q9NZM5 478 aaKnown RBP12.93□□□□□ -0.34
NLRC3-201ENST00000324659 ASIC3Q9UHC3 531 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 FAM187AA6NFU0 413 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 TCP11X1B4DZS4 312 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 CLDN3O15551 220 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 CYP26A1O43174 497 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 MGRN1O60291 552 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 PTGIRP43119 386 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 STAT2P52630 851 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 PPP3CAQ08209 521 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 XRCC4Q13426 336 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 C2CD6Q53TS8 623 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 DAB2IPQ5VWQ8 1189 aa12.93□□□□□ -0.34
NLRC3-201ENST00000324659 FLAD1Q8NFF5 587 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms