RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 MGRN1O60291 552 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 BRAFP15056 766 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 FERP16591 822 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 MMP13P45452 471 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 KRT17Q04695 432 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 EDRF1Q3B7T1 1238 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 SLFN11Q7Z7L1 901 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 SYCE1Q8N0S2 351 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 SYT2Q8N9I0 419 aaPredicted RBP13.94□□□□□ -0.18
SNX1-201ENST00000261889 SLC5A5Q92911 643 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 CALR3Q96L12 384 aaKnown RBP13.94□□□□□ -0.18
SNX1-201ENST00000261889 WDR18Q9BV38 432 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 NUP85Q9BW27 656 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 KAT6AQ92794 2004 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 DNAH12Q6ZR08 3092 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 CCDC169A6NNP5 214 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 K7ENM7 598 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 MAP3K13O43283 966 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 ZSCAN5DPP0CG00 497 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 PSMC2P35998 433 aaKnown RBP13.94□□□□□ -0.18
SNX1-201ENST00000261889 PTGIRP43119 386 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 MGAT5Q09328 741 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 NOP9Q86U38 636 aaKnown RBP13.94□□□□□ -0.18
SNX1-201ENST00000261889 TBC1D16Q8TBP0 767 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 ZNF653Q96CK0 615 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 FAXDC2Q96IV6 333 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 ETNK1Q9HBU6 452 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 A6NNZ2 444 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 GOLGA8RI6L899 631 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 TUBB8Q3ZCM7 444 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 CDC42EP5Q6NZY7 148 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 AGPAT3Q9NRZ7 376 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 TRAF3IP3Q9Y228 551 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 FRMD4BQ9Y2L6 1034 aa13.94□□□□□ -0.18
SNX1-201ENST00000261889 MAST2Q6P0Q8 1798 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 C5orf60A6NFR6 353 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 SNX3O60493 162 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 CBX6O95503 412 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 KRT5P13647 590 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 ETS1P14921 441 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 GCFC2P16383 781 aaKnown RBP13.93□□□□□ -0.18
SNX1-201ENST00000261889 KCNA3P22001 575 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 RPL13P26373 211 aaKnown RBP13.93□□□□□ -0.18
SNX1-201ENST00000261889 DGKZQ13574 1117 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 WLSQ5T9L3 541 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 CPA5Q8WXQ8 436 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 TGS1Q96RS0 853 aaKnown RBP13.93□□□□□ -0.18
SNX1-201ENST00000261889 AGPAT1Q99943 283 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 METTL5Q9NRN9 209 aaKnown RBP13.93□□□□□ -0.18
SNX1-201ENST00000261889 APEX2Q9UBZ4 518 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 SWAP70Q9UH65 585 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 HAO1Q9UJM8 370 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 PDXKO00764 312 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 ARP10275 920 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 STX2P32856 288 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 OVGP1Q12889 678 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 SMAD1Q15797 465 aaKnown RBP13.93□□□□□ -0.18
SNX1-201ENST00000261889 GRIPAP1Q4V328 841 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 LRCH2Q5VUJ6 765 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 RNF207Q6ZRF8 634 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 GLIS1Q8NBF1 620 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 PLEKHO2Q8TD55 490 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 ATF5Q9Y2D1 282 aaPredicted RBP13.93□□□□□ -0.18
SNX1-201ENST00000261889 ROBO3Q96MS0 1386 aa13.93□□□□□ -0.18
SNX1-201ENST00000261889 C2orf71A6NGG8 1288 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 F5H6K3 240 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 NQO1P15559 274 aaKnown RBP13.92□□□□□ -0.18
SNX1-201ENST00000261889 RPA1P27694 616 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 DRP2Q13474 957 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 ATP13A4Q4VNC1 1196 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 HS2ST1Q7LGA3 356 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 TXLNGYQ9BZA5 131 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 DDX60LQ5H9U9 1706 aaKnown RBP13.92□□□□□ -0.18
SNX1-201ENST00000261889 THAP12O43422 761 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 SLITRK3O94933 977 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 ADCY8P40145 1251 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 CALCOCO2Q13137 446 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 SGO2Q562F6 1265 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 SEL1L2Q5TEA6 688 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 VSTM1Q6UX27 236 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 ZBTB10Q96DT7 871 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 PAGR1Q9BTK6 254 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 AAASQ9NRG9 546 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 FBXO28Q9NVF7 368 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 MTRF1LQ9UGC7 380 aaKnown RBP13.92□□□□□ -0.18
SNX1-201ENST00000261889 BZW2Q9Y6E2 419 aaKnown RBP13.92□□□□□ -0.18
SNX1-201ENST00000261889 PHF2O75151 1096 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 TMEM253P0C7T8 217 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 BMP3P12645 472 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 CD58P19256 250 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 PRKCIP41743 596 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 ITGA8P53708 1063 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 MARSP56192 900 aaKnown RBP13.92□□□□□ -0.18
SNX1-201ENST00000261889 ICA1Q05084 483 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 FASTKD3Q14CZ7 662 aaKnown RBP13.92□□□□□ -0.18
SNX1-201ENST00000261889 EPM2AIP1Q7L775 607 aaPredicted RBP13.92□□□□□ -0.18
SNX1-201ENST00000261889 TEX2Q8IWB9 1127 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 ERMNQ8TAM6 284 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 ZSWIM1Q9BR11 485 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 STK33Q9BYT3 514 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms