RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 PPME1Q9Y570 386 aa19.99■□□□□ 0.79
HOXC11-201ENST00000243082 SIP14410 1827 aa19.99■□□□□ 0.79
HOXC11-201ENST00000243082 LOC102724159A0A0B4J2E5 919 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 SASH3O75995 380 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 EDN1P05305 212 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 CLDN10P78369 228 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 PWP2Q15269 919 aaKnown RBP19.98■□□□□ 0.79
HOXC11-201ENST00000243082 LONRF2Q1L5Z9 754 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 BEND6Q5SZJ8 279 aaPredicted RBP19.98■□□□□ 0.79
HOXC11-201ENST00000243082 PLPPR4Q7Z2D5 763 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 PPM1KQ8N3J5 372 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 MMGT1Q8N4V1 131 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 ZNF516Q92618 1163 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 GLG1Q92896 1179 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 COPS5Q92905 334 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 MS4A4AQ96JQ5 239 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 ZBTB45Q96K62 511 aaPredicted RBP19.98■□□□□ 0.79
HOXC11-201ENST00000243082 RNF216Q9NWF9 866 aaPredicted RBP19.98■□□□□ 0.79
HOXC11-201ENST00000243082 TAS2R14Q9NYV8 317 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 AGO2Q9UKV8 859 aaKnown RBP19.98■□□□□ 0.79
HOXC11-201ENST00000243082 TMCO5BA8MYB1 307 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 ZBTB42B2RXF5 422 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 NOP56O00567 594 aaKnown RBP19.98■□□□□ 0.79
HOXC11-201ENST00000243082 ADCY3O60266 1144 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 TMEM253P0C7T8 217 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 MARK3P27448 753 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 MFAP3P55082 362 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 NLRP11P59045 1033 aaKnown RBP19.98■□□□□ 0.79
HOXC11-201ENST00000243082 PRPF4BQ13523 1007 aaKnown RBP19.98■□□□□ 0.79
HOXC11-201ENST00000243082 CRELD2Q6UXH1 353 aaPredicted RBP19.98■□□□□ 0.79
HOXC11-201ENST00000243082 C15orf39Q6ZRI6 1047 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 DHX37Q8IY37 1157 aaKnown RBP19.98■□□□□ 0.79
HOXC11-201ENST00000243082 GTF3C2Q8WUA4 911 aaPredicted RBP19.98■□□□□ 0.79
HOXC11-201ENST00000243082 PRPF31Q8WWY3 499 aaKnown RBP19.98■□□□□ 0.79
HOXC11-201ENST00000243082 SHC3Q92529 594 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 SPATA33Q96N06 139 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 TARS2Q9BW92 718 aaKnown RBP19.98■□□□□ 0.79
HOXC11-201ENST00000243082 FUT8Q9BYC5 575 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 ABCB6Q9NP58 842 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 PDGFCQ9NRA1 345 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 MCM3APO60318 1980 aa19.98■□□□□ 0.79
HOXC11-201ENST00000243082 TARSL2A2RTX5 802 aaKnown RBP19.97■□□□□ 0.79
HOXC11-201ENST00000243082 KIAA0391O15091 583 aaKnown RBP19.97■□□□□ 0.79
HOXC11-201ENST00000243082 WNT7BP56706 349 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 MKRN4PQ13434 485 aaPredicted RBP19.97■□□□□ 0.79
HOXC11-201ENST00000243082 PSMD6Q15008 389 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 SLFN11Q7Z7L1 901 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 GPRC5AQ8NFJ5 357 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 ATP8B4Q8TF62 1192 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 MS4A14Q96JA4 679 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 GOLPH3Q9H4A6 298 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 RNF14Q9UBS8 474 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 NCANO14594 1321 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 PDHXO00330 501 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 SGPL1O95470 568 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 TXNP10599 105 aaKnown RBP19.97■□□□□ 0.79
HOXC11-201ENST00000243082 PAFAH1B1P43034 410 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 ACOT2P49753 483 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 PLCB4Q15147 1175 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 CCDC181Q5TID7 509 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 SLFN12LQ6IEE8 588 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 KRT222Q8N1A0 295 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 FAM84AQ96KN4 292 aa19.97■□□□□ 0.79
HOXC11-201ENST00000243082 A0A0B4J269 797 aa19.96■□□□□ 0.79
HOXC11-201ENST00000243082 IGKV6-21A0A0C4DH24 114 aa19.96■□□□□ 0.79
HOXC11-201ENST00000243082 ASB14A6NK59 587 aa19.96■□□□□ 0.79
HOXC11-201ENST00000243082 BTBD19C9JJ37 291 aa19.96■□□□□ 0.79
HOXC11-201ENST00000243082 USP8P40818 1118 aa19.96■□□□□ 0.79
HOXC11-201ENST00000243082 IER5Q5VY09 327 aa19.96■□□□□ 0.79
HOXC11-201ENST00000243082 EPS8L1Q8TE68 723 aa19.96■□□□□ 0.79
HOXC11-201ENST00000243082 TATDN2Q93075 761 aa19.96■□□□□ 0.79
HOXC11-201ENST00000243082 NT5C1BQ96P26 610 aa19.96■□□□□ 0.79
HOXC11-201ENST00000243082 SEPT11Q9NVA2 429 aaKnown RBP19.96■□□□□ 0.79
HOXC11-201ENST00000243082 NOCTQ9UK39 431 aaKnown RBP19.96■□□□□ 0.79
HOXC11-201ENST00000243082 ERLIN1O75477 346 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 CETPP11597 493 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 CHRNB2P17787 502 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 PLA2G4AP47712 749 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 DNA2P51530 1060 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 ZNF792Q3KQV3 632 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 CFAP221Q4G0U5 840 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 ARMCX2Q7L311 632 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 RPUSD2Q8IZ73 545 aaKnown RBP19.95■□□□□ 0.78
HOXC11-201ENST00000243082 SLC35G2Q8TBE7 412 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 RFFLQ8WZ73 363 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 ELMO3Q96BJ8 720 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 OSGEPQ9NPF4 335 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 SLC45A1Q9Y2W3 748 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 ADGRA2Q96PE1 1338 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 ANKRD62A6NC57 917 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 CYP26A1O43174 497 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 KIF4AO95239 1232 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 ABCB4P21439 1286 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 TTLL4Q14679 1199 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 RPS6KA1Q15418 735 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 ZBTB41Q5SVQ8 909 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 LMBRD2Q68DH5 695 aaPredicted RBP19.95■□□□□ 0.78
HOXC11-201ENST00000243082 NOP9Q86U38 636 aaKnown RBP19.95■□□□□ 0.78
HOXC11-201ENST00000243082 LMBR1Q8WVP7 490 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 CTNNBL1Q8WYA6 563 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms