RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 TMEM154Q6P9G4 183 aa11.73□□□□□ -0.53
CCDC170-201ENST00000239374 RHOT1Q8IXI2 618 aa11.73□□□□□ -0.53
CCDC170-201ENST00000239374 DNAJC9Q8WXX5 260 aa11.73□□□□□ -0.53
CCDC170-201ENST00000239374 SERPINB12Q96P63 405 aa11.73□□□□□ -0.53
CCDC170-201ENST00000239374 ZWILCHQ9H900 591 aa11.73□□□□□ -0.53
CCDC170-201ENST00000239374 IFT122Q9HBG6 1241 aa11.73□□□□□ -0.53
CCDC170-201ENST00000239374 FAM208AQ9UK61 1670 aaKnown RBP11.73□□□□□ -0.53
CCDC170-201ENST00000239374 PI4K2BG5E9Z4 385 aa11.73□□□□□ -0.53
CCDC170-201ENST00000239374 SERPINB2P05120 415 aa11.73□□□□□ -0.53
CCDC170-201ENST00000239374 SMARCA1P28370 1054 aa11.73□□□□□ -0.53
CCDC170-201ENST00000239374 SSTR3P32745 418 aaPredicted RBP11.73□□□□□ -0.53
CCDC170-201ENST00000239374 NT5DC3Q86UY8 548 aa11.73□□□□□ -0.53
CCDC170-201ENST00000239374 ANKMY2Q8IV38 441 aa11.73□□□□□ -0.53
CCDC170-201ENST00000239374 CFAP36Q96G28 342 aa11.73□□□□□ -0.53
CCDC170-201ENST00000239374 CDC42EP4Q9H3Q1 356 aaKnown RBP11.73□□□□□ -0.53
CCDC170-201ENST00000239374 KLHL11Q9NVR0 708 aa11.73□□□□□ -0.53
CCDC170-201ENST00000239374 SCINQ9Y6U3 715 aa11.73□□□□□ -0.53
CCDC170-201ENST00000239374 IPO5O00410 1097 aaKnown RBP11.72□□□□□ -0.53
CCDC170-201ENST00000239374 TLR3O15455 904 aaKnown RBP11.72□□□□□ -0.53
CCDC170-201ENST00000239374 KCNQ2O43526 872 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 ARSEP51690 589 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 NPEPPSP55786 919 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 P3H1Q32P28 736 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 ZNF394Q53GI3 561 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 SH2D4BQ5SQS7 431 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 SLC17A8Q8NDX2 589 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 ATG4AQ8WYN0 398 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 RBM41Q96IZ5 413 aaKnown RBP11.72□□□□□ -0.53
CCDC170-201ENST00000239374 UVRAGQ9P2Y5 699 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 DDX3XO00571 662 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCDC170-201ENST00000239374 COPEO14579 308 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 HMGB2P26583 209 aaKnown RBP11.72□□□□□ -0.53
CCDC170-201ENST00000239374 CDC25CP30307 473 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 POLGP54098 1239 aaPredicted RBP11.72□□□□□ -0.53
CCDC170-201ENST00000239374 PDE1BQ01064 536 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 QPCTQ16769 361 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 GRAMD1BQ3KR37 738 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 C1orf146Q5VVC0 180 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 DARS2Q6PI48 645 aaKnown RBP11.72□□□□□ -0.53
CCDC170-201ENST00000239374 TMEM270Q6UE05 265 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 TXNRD3Q86VQ6 643 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 Q9H521 79 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 SEPT9Q9UHD8 586 aaPredicted RBP11.72□□□□□ -0.53
CCDC170-201ENST00000239374 HAO1Q9UJM8 370 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 GGA2Q9UJY4 613 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 ZBED4O75132 1171 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 KITP10721 976 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 BTNL9Q6UXG8 535 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 TMEM179Q6ZVK1 233 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 CYFIP1Q7L576 1253 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 GSDMBQ8TAX9 411 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 MIEF2Q96C03 454 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 ZBTB10Q96DT7 871 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 FGD4Q96M96 766 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 ABCF3Q9NUQ8 709 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 DLGAP2Q9P1A6 1054 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 C15orf41Q9Y2V0 281 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 A0A0A6YYK5 440 aaPredicted RBP11.72□□□□□ -0.53
CCDC170-201ENST00000239374 CES2O00748 559 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCDC170-201ENST00000239374 ST13P4Q8IZP2 240 aaPredicted RBP11.72□□□□□ -0.53
CCDC170-201ENST00000239374 RUSC1Q9BVN2 902 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 KCNG1Q9UIX4 513 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 TACC3Q9Y6A5 838 aa11.72□□□□□ -0.53
CCDC170-201ENST00000239374 SPECC1L-ADORA2AF8WAN1 911 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 H0YCG3 227 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 NVLO15381 856 aaKnown RBP11.71□□□□□ -0.53
CCDC170-201ENST00000239374 SHBGP04278 402 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 SATB1Q01826 763 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 GIT2Q14161 759 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 HAUS6Q7Z4H7 955 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 C4orf32Q8N8J7 132 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 SMYD3Q9H7B4 428 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 XRN1Q8IZH2 1706 aaKnown RBP11.71□□□□□ -0.53
CCDC170-201ENST00000239374 KIF3CO14782 793 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 PPEF1O14829 653 aaPredicted RBP11.71□□□□□ -0.53
CCDC170-201ENST00000239374 DNAJC8O75937 253 aaPredicted RBP11.71□□□□□ -0.53
CCDC170-201ENST00000239374 TMEM191BP0C7N4 346 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 MTM1Q13496 603 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 DLGAP5Q15398 846 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 NXNQ6DKJ4 435 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 MCF2L2Q86YR7 1114 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 PURBQ96QR8 312 aaKnown RBP11.71□□□□□ -0.53
CCDC170-201ENST00000239374 CENPKQ9BS16 269 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 SENP1Q9P0U3 644 aa11.71□□□□□ -0.53
CCDC170-201ENST00000239374 SMG5Q9UPR3 1016 aaKnown RBP11.71□□□□□ -0.53
CCDC170-201ENST00000239374 NOL3O60936 208 aaKnown RBP11.71□□□□□ -0.54
CCDC170-201ENST00000239374 RPS6KA4O75676 772 aa11.71□□□□□ -0.54
CCDC170-201ENST00000239374 STK10O94804 968 aaKnown RBP11.71□□□□□ -0.54
CCDC170-201ENST00000239374 EIF2AK2P19525 551 aaKnown RBP11.71□□□□□ -0.54
CCDC170-201ENST00000239374 MAGEA4P43358 317 aa11.71□□□□□ -0.54
CCDC170-201ENST00000239374 CTCFP49711 727 aaPredicted RBP11.71□□□□□ -0.54
CCDC170-201ENST00000239374 GPSM2P81274 684 aa11.71□□□□□ -0.54
CCDC170-201ENST00000239374 EIF1ADQ8N9N8 165 aaKnown RBP11.71□□□□□ -0.54
CCDC170-201ENST00000239374 KCTD6Q8NC69 237 aa11.71□□□□□ -0.54
CCDC170-201ENST00000239374 FBXL13Q8NEE6 735 aa11.71□□□□□ -0.54
CCDC170-201ENST00000239374 CPA5Q8WXQ8 436 aa11.71□□□□□ -0.54
CCDC170-201ENST00000239374 FAM213AQ9BRX8 229 aa11.71□□□□□ -0.54
CCDC170-201ENST00000239374 MKNK1Q9BUB5 465 aa11.71□□□□□ -0.54
CCDC170-201ENST00000239374 TMEM117Q9H0C3 514 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms