RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 TTC8Q8TAM2 541 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 ATG4AQ8WYN0 398 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 RPGRQ92834 1020 aaKnown RBP15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 DYDC2Q96IM9 177 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 TGS1Q96RS0 853 aaKnown RBP15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 UBE2TQ9NPD8 197 aaPredicted RBP15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 GRHL1Q9NZI5 618 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 ZNF232Q9UNY5 417 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 TOGARAM1Q9Y4F4 1720 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 PYGMP11217 842 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 COMTP21964 271 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 CACNA2D1P54289 1103 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 SLC12A3P55017 1021 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 UBL4BQ8N7F7 174 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 SUPT20HQ8NEM7 779 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 PGM2Q96G03 612 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 TAOK3Q9H2K8 898 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 RMI1Q9H9A7 625 aa15.14■□□□□ 0.01
PCDHB3-201ENST00000231130 SHROOM1Q2M3G4 852 aaPredicted RBP15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 SNRNP27Q8WVK2 155 aaKnown RBP15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 SH2D3AQ9BRG2 576 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 ANO3Q9BYT9 981 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 CDC42EP4Q9H3Q1 356 aaKnown RBP15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 BTNL10A8MVZ5 291 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 RIMBP2O15034 1052 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 NVLO15381 856 aaKnown RBP15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 EXOC3O60645 756 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 SPAG7O75391 227 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 ALADP13716 330 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 PRKCIP41743 596 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 BNIP1Q12981 228 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 ARHGAP27Q6ZUM4 889 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 ZNF365Q70YC5 407 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 PRUNE1Q86TP1 453 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 LRRC8CQ8TDW0 803 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 SPIRE2Q8WWL2 714 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 PLEKHG4BQ96PX9 1271 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 RTFDC1Q9BY42 306 aaPredicted RBP15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 CARD9Q9H257 536 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 ARL2BPQ9Y2Y0 163 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 A0A1B0GUL6 1792 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 CLDN3O15551 220 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 MARSP56192 900 aaKnown RBP15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 RBM26Q5T8P6 1007 aaKnown RBP15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 CYP4F22Q6NT55 531 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 STK32AQ8WU08 396 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 CENPTQ96BT3 561 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 PKD2L1Q9P0L9 805 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 ASTN1O14525 1302 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 PFASO15067 1338 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 CCDC88AQ3V6T2 1871 aa15.13■□□□□ 0.01
PCDHB3-201ENST00000231130 A0A1W2PRG0 241 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 ESYT2A0FGR8 921 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 PHF2O75151 1096 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 UFL1O94874 794 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 NUDT17P0C025 328 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 MAGEA10P43363 369 aaPredicted RBP15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 C2CD6Q53TS8 623 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 ZFYVE27Q5T4F4 411 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 DPY19L2P1Q6NXN4 242 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 RFX8Q6ZV50 586 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 ERP27Q96DN0 273 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 DDX27Q96GQ7 796 aaKnown RBP15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 C9orf72Q96LT7 481 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 PHACTR1Q9C0D0 580 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 VCX3BQ9H321 246 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 VCX3AQ9NNX9 186 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 TYW1Q9NV66 732 aaKnown RBP15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 ZSCAN9O15535 394 aaPredicted RBP15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 TOM1O60784 492 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 ATP9AO75110 1047 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 CALCAP01258 141 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 TMEM253P0C7T8 217 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 SKIP12755 728 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 CHKAP35790 457 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 FMO5P49326 533 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 C1QTNF12Q5T7M4 302 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 TPTE2Q6XPS3 522 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 ARL10Q8N8L6 244 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 PHC3Q8NDX5 983 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 METTL14Q9HCE5 456 aaKnown RBP15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 KCNMB3Q9NPA1 279 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 ARHGEF3Q9NR81 526 aa15.12■□□□□ 0.01
PCDHB3-201ENST00000231130 TISP43B9A030 160 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 PDXKO00764 312 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 THAP12O43422 761 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 PSMC2P35998 433 aaKnown RBP15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 MPP2Q14168 576 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 DAB2IPQ5VWQ8 1189 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 ZFAND2BQ8WV99 257 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 KAT5Q92993 513 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 CCDC97Q96F63 343 aaPredicted RBP15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 HEMGNQ9BXL5 484 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 TXLNGYQ9BZA5 131 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 CHMP2BQ9UQN3 213 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 FAM187AA6NFU0 413 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 C6orf229H3BNL8 230 aa15.11■□□□□ 0.01
PCDHB3-201ENST00000231130 IMPDH2P12268 514 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms