RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 EDIL3O43854 480 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 LCA5LO95447 670 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 UBL4AP11441 157 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 CPA3P15088 417 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 PLCG2P16885 1265 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 WASHC5Q12768 1159 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 ZBTB17Q13105 803 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 UBE2SQ16763 222 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 PCNX4Q63HM2 1172 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 CCDC84Q86UT8 332 aaPredicted RBP8.55□□□□□ -1.04
RTTN-223ENST00000640931 PNMA8AQ86V59 439 aaPredicted RBP8.55□□□□□ -1.04
RTTN-223ENST00000640931 SIAH1Q8IUQ4 282 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 TMEM139Q8IV31 216 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 MAP7D3Q8IWC1 876 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 ARFGAP2Q8N6H7 521 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 ATP8B4Q8TF62 1192 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 PMM1Q92871 262 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 SEC16BQ96JE7 1060 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 CEP295NLQ96MC4 621 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 GDAP1L1Q96MZ0 367 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 EURLQ9NYK6 297 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 SERPINB13Q9UIV8 391 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 CCPG1Q9ULG6 757 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 MAFFQ9ULX9 164 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 PCDHA4Q9UN74 947 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 SLC12A4Q9UP95 1085 aa8.55□□□□□ -1.04
RTTN-223ENST00000640931 GMNCA6NCL1 334 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 USP17L10C9JJH3 530 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 E7EVH7 732 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 PSMD14O00487 310 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 CETN3O15182 167 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 B3GALNT1O75752 331 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 UPP2O95045 317 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 NAPAP54920 295 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 PPP2R5BQ15173 497 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 MUM1Q2TAK8 710 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 CNPY1Q3B7I2 92 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 TMEM259Q4ZIN3 620 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 TTMPQ5BVD1 217 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 LCE2DQ5TA82 110 aaPredicted RBP8.54□□□□□ -1.04
RTTN-223ENST00000640931 DEPDC1Q5TB30 811 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 STRIP1Q5VSL9 837 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 DAB2IPQ5VWQ8 1189 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 FOXB2Q5VYV0 432 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 TRIM68Q6AZZ1 485 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 HHIPL2Q6UWX4 724 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 PODNQ7Z5L7 613 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 MLKLQ8NB16 471 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 SH3TC2Q8TF17 1288 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 DIS3LQ8TF46 1054 aaKnown RBP8.54□□□□□ -1.04
RTTN-223ENST00000640931 MAELQ96JY0 434 aaKnown RBP8.54□□□□□ -1.04
RTTN-223ENST00000640931 RNPC3Q96LT9 517 aaKnown RBP8.54□□□□□ -1.04
RTTN-223ENST00000640931 CCDC42Q96M95 316 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 BARHL2Q9NY43 387 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 NDUFA13Q9P0J0 144 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 HSFX1Q9UBD0 423 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 LNPEPQ9UIQ6 1025 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 TUBE1Q9UJT0 475 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 TSC22D4Q9Y3Q8 395 aa8.54□□□□□ -1.04
RTTN-223ENST00000640931 KANSL1LA0AUZ9 987 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 SMCO2A6NFE2 343 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 TNFRSF10AO00220 468 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 TSPAN1O60635 241 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 HSF2BPO75031 334 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 FBXO21O94952 628 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 GBP1P32455 592 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 SARSP49591 514 aaKnown RBP8.53□□□□□ -1.04
RTTN-223ENST00000640931 CLK1P49759 484 aaKnown RBP8.53□□□□□ -1.04
RTTN-223ENST00000640931 ADARP55265 1226 aaKnown RBP8.53□□□□□ -1.04
RTTN-223ENST00000640931 STX17P56962 302 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 ATP2C1P98194 919 aaPredicted RBP8.53□□□□□ -1.04
RTTN-223ENST00000640931 ATP11AP98196 1134 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 DPYDQ12882 1025 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 TUBA3CQ13748 450 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 KARSQ15046 597 aaKnown RBP8.53□□□□□ -1.04
RTTN-223ENST00000640931 FAM209AQ5JX71 171 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 CCBE1Q6UXH8 406 aaPredicted RBP8.53□□□□□ -1.04
RTTN-223ENST00000640931 CCNI2Q6ZMN8 369 aaPredicted RBP8.53□□□□□ -1.04
RTTN-223ENST00000640931 C11orf96Q7Z7L8 435 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 PALB2Q86YC2 1186 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 CFAP61Q8NHU2 1237 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 RBM46Q8TBY0 533 aaKnown RBP8.53□□□□□ -1.04
RTTN-223ENST00000640931 FBF1Q8TES7 1133 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.53□□□□□ -1.04
RTTN-223ENST00000640931 ABTB1Q969K4 478 aaPredicted RBP8.53□□□□□ -1.04
RTTN-223ENST00000640931 ZDHHC15Q96MV8 337 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 SLF1Q9BQI6 1058 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 INO80BQ9C086 356 aaPredicted RBP8.53□□□□□ -1.04
RTTN-223ENST00000640931 GBA3Q9H227 469 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 ABCF3Q9NUQ8 709 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 FAIMQ9NVQ4 179 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 LARSQ9P2J5 1176 aaKnown RBP8.53□□□□□ -1.04
RTTN-223ENST00000640931 STK39Q9UEW8 545 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 HEY1Q9Y5J3 304 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 ZNF646O15015 1829 aaPredicted RBP8.53□□□□□ -1.04
RTTN-223ENST00000640931 SIPA1L1O43166 1804 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 ITIH6Q6UXX5 1313 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 QSER1Q2KHR3 1735 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 CCT8L1PA6NM43 557 aa8.53□□□□□ -1.04
RTTN-223ENST00000640931 MAP3K7O43318 606 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms