RNA–Protein interactions for RNA: ENST00000638873.1

SPIN3-215, Transcript of spindlin family member 3, humanhuman

TSL 2

Gene SPIN3, Length 3,221 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-215ENST00000638873 CKAP2Q8WWK9 683 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 KRT35Q92764 455 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 ZSWIM1Q9BR11 485 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 MTMR4Q9NYA4 1195 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 TRIM33Q9UPN9 1127 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 PCDHA3Q9Y5H8 950 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 TAF1LQ8IZX4 1826 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 TNRC6CQ9HCJ0 1690 aaKnown RBP13.2□□□□□ -0.3
SPIN3-215ENST00000638873 PPP1R11O60927 126 aaPredicted RBP13.2□□□□□ -0.3
SPIN3-215ENST00000638873 HIP1RO75146 1068 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 ACSL3O95573 720 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 ALAS1P13196 640 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 PSMC6P62333 389 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 MKRN3Q13064 507 aaKnown RBP13.2□□□□□ -0.3
SPIN3-215ENST00000638873 C11orf63Q6NUN7 778 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 KIAA0825Q8IV33 1275 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 ANKRD27Q96NW4 1050 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 CAMKK2Q96RR4 588 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 SYT11Q9BT88 431 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 PCDHAC2Q9Y5I4 1007 aa13.2□□□□□ -0.3
SPIN3-215ENST00000638873 HGSO14964 777 aaPredicted RBP13.19□□□□□ -0.3
SPIN3-215ENST00000638873 WFS1O76024 890 aa13.19□□□□□ -0.3
SPIN3-215ENST00000638873 PDE6BP35913 854 aa13.19□□□□□ -0.3
SPIN3-215ENST00000638873 COILP38432 576 aaPredicted RBP13.19□□□□□ -0.3
SPIN3-215ENST00000638873 CCNG1P51959 295 aa13.19□□□□□ -0.3
SPIN3-215ENST00000638873 VSTM1Q6UX27 236 aa13.19□□□□□ -0.3
SPIN3-215ENST00000638873 FBF1Q8TES7 1133 aa13.19□□□□□ -0.3
SPIN3-215ENST00000638873 TGS1Q96RS0 853 aaKnown RBP13.19□□□□□ -0.3
SPIN3-215ENST00000638873 FAM167BQ9BTA0 163 aa13.19□□□□□ -0.3
SPIN3-215ENST00000638873 CDC42EP4Q9H3Q1 356 aaKnown RBP13.19□□□□□ -0.3
SPIN3-215ENST00000638873 ANKRD63C9JTQ0 380 aa13.19□□□□□ -0.3
SPIN3-215ENST00000638873 CREB1P16220 341 aa13.19□□□□□ -0.3
SPIN3-215ENST00000638873 SKIV2L2P42285 1042 aaKnown RBP13.19□□□□□ -0.3
SPIN3-215ENST00000638873 MARCKSL1P49006 195 aa13.19□□□□□ -0.3
SPIN3-215ENST00000638873 FMO5P49326 533 aa13.19□□□□□ -0.3
SPIN3-215ENST00000638873 KCNV2Q8TDN2 545 aa13.19□□□□□ -0.3
SPIN3-215ENST00000638873 FBXO41Q8TF61 875 aa13.19□□□□□ -0.3
SPIN3-215ENST00000638873 SH3GL3Q99963 347 aa13.19□□□□□ -0.3
SPIN3-215ENST00000638873 DDX23Q9BUQ8 820 aaKnown RBP13.19□□□□□ -0.3
SPIN3-215ENST00000638873 PRKAG3Q9UGI9 489 aa13.19□□□□□ -0.3
SPIN3-215ENST00000638873 SCAF8Q9UPN6 1271 aaKnown RBP13.19□□□□□ -0.3
SPIN3-215ENST00000638873 RSPH10B2B2RC85 870 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 RAD21O60216 631 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 TTLL1O95922 423 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 RSPH10BP0C881 870 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 SNHG28P0DPA3 235 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 STX2P32856 288 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 HADHBP55084 474 aaKnown RBP13.18□□□□□ -0.3
SPIN3-215ENST00000638873 ZNF543Q08ER8 600 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 ARHGAP44Q17R89 818 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 RMDN2Q96LZ7 410 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 ETNK1Q9HBU6 452 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 USP40Q9NVE5 1235 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 DDX60LQ5H9U9 1706 aaKnown RBP13.18□□□□□ -0.3
SPIN3-215ENST00000638873 CCNB1P14635 433 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 ATP2B4P23634 1241 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 KCNA1Q09470 495 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 RNF43Q68DV7 783 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 PALB2Q86YC2 1186 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 TEX9Q8N6V9 391 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 NAF1Q96HR8 494 aaKnown RBP13.18□□□□□ -0.3
SPIN3-215ENST00000638873 YIPF3Q9GZM5 350 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 TXLNGQ9NUQ3 528 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 MYO3BQ8WXR4 1341 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 IRS2Q9Y4H2 1338 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 ENO4A6NNW6 628 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 USP17L15C9J2P7 530 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 USP17L13C9JLJ4 530 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 USP17L11C9JVI0 530 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 USP17L18D6R9N7 530 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 USP17L22D6RA61 530 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 USP17L17D6RBQ6 530 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 USP17L19D6RCP7 530 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 USP17L20D6RJB6 530 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 ZBTB5O15062 677 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 BRAFP15056 766 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 RPA1P27694 616 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 USP17L24Q0WX57 530 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 MKRN4PQ13434 485 aaPredicted RBP13.18□□□□□ -0.3
SPIN3-215ENST00000638873 RRP1BQ14684 758 aaKnown RBP13.18□□□□□ -0.3
SPIN3-215ENST00000638873 TTBK2Q6IQ55 1244 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 USP17L6PQ6QN14 398 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 ZDHHC14Q8IZN3 488 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 BORCS6Q96GS4 357 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 AGPAT1Q99943 283 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 OSBPL1AQ9BXW6 950 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 GPR88Q9GZN0 384 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 INTS2Q9H0H0 1204 aaKnown RBP13.18□□□□□ -0.3
SPIN3-215ENST00000638873 ZFATQ9P243 1243 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 APEX2Q9UBZ4 518 aa13.18□□□□□ -0.3
SPIN3-215ENST00000638873 UNC5CO95185 931 aa13.17□□□□□ -0.3
SPIN3-215ENST00000638873 ECEL1O95672 775 aa13.17□□□□□ -0.3
SPIN3-215ENST00000638873 NPR1P16066 1061 aa13.17□□□□□ -0.3
SPIN3-215ENST00000638873 COMTP21964 271 aa13.17□□□□□ -0.3
SPIN3-215ENST00000638873 SLC16A2P36021 539 aa13.17□□□□□ -0.3
SPIN3-215ENST00000638873 MESDQ14696 234 aa13.17□□□□□ -0.3
SPIN3-215ENST00000638873 CYP1B1Q16678 543 aa13.17□□□□□ -0.3
SPIN3-215ENST00000638873 AOC3Q16853 763 aa13.17□□□□□ -0.3
SPIN3-215ENST00000638873 INTS8Q75QN2 995 aaKnown RBP13.17□□□□□ -0.3
SPIN3-215ENST00000638873 RPS6KC1Q96S38 1066 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms