RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	LRSAM1	Q6UWE0	723 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	CATSPER4	Q7RTX7	472 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	IGDCC4	Q8TDY8	1250 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	MAP3K14	Q99558	947 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	ZNF577	Q9BSK1	485 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	RSAD1	Q9HA92	442 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	NRBP2	Q9NSY0	501 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	PCDHA10	Q9Y5I2	948 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	SDK1	Q7Z5N4	2213 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	FAM86B1	E9PN63	330 aa		13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	TM4SF5	O14894	197 aa		13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	OAT	P04181	439 aa		13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	FAM86B2	P0C5J1	330 aa		13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	CCDC6	Q16204	474 aa		13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	LILRA6	Q6PI73	481 aa		13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	KDF1	Q8NAX2	398 aa	Predicted RBP	13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	NCOA7	Q8NI08	942 aa		13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	ITFG1	Q8TB96	612 aa		13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	MAP4K1	Q92918	833 aa		13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	IL25	Q9H293	177 aa		13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	CHRD	Q9H2X0	955 aa		13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	RXFP3	Q9NSD7	469 aa		13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	TAF6L	Q9Y6J9	622 aa		13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	F5	P12259	2224 aa		13.21	□□□□□ -0.29
PAX6-238	ENST00000638755	SHISA7	A6NL88	538 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	CHURC1-FNTB	B4DL54	471 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	HIP1	O00291	1037 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	CCL16	O15467	120 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	KCNK5	O95279	499 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	FOS	P01100	380 aa	Predicted RBP	13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	CYP21A2	P08686	494 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	SREBF1	P36956	1147 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	FNTB	P49356	437 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	CCR3	P51677	355 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	LIMK1	P53667	647 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	ANTXR2	P58335	489 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	SATB1	Q01826	763 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	PRKCE	Q02156	737 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	RING1	Q06587	406 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	NFXL1	Q6ZNB6	911 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	NIPA1	Q7RTP0	329 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	RAB11FIP4	Q86YS3	637 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	COLGALT2	Q8IYK4	626 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	RNF168	Q8IYW5	571 aa	Predicted RBP	13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	FAM160A2	Q8N612	972 aa	Predicted RBP	13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	C12orf50	Q8NA57	414 aa	Predicted RBP	13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	ING5	Q8WYH8	240 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	PLA2G2F	Q9BZM2	168 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	INO80B	Q9C086	356 aa	Predicted RBP	13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	LNPK	Q9C0E8	428 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	RIC8A	Q9NPQ8	531 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	TBC1D22B	Q9NU19	505 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	LHX6	Q9UPM6	363 aa		13.2	□□□□□ -0.3
PAX6-238	ENST00000638755		U3KPZ7	1027 aa	Predicted RBP	13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	GCN1	Q92616	2671 aa	Known RBP	13.2	□□□□□ -0.3
PAX6-238	ENST00000638755	FLNB	O75369	2602 aa	Known RBP	13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	SRRM3	A6NNA2	597 aa	Predicted RBP	13.19	□□□□□ -0.3
PAX6-238	ENST00000638755		E7EWF7	191 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	ZNF862	O60290	1169 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	EFEMP2	O95967	443 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	SPINK2	P20155	84 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	CXCL12	P48061	93 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	ADCY7	P51828	1080 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	NAPA	P54920	295 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	PPM1L	Q5SGD2	360 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	STPG1	Q5TH74	334 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	HEATR6	Q6AI08	1181 aa	Known RBP	13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	WWC2	Q6AWC2	1192 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	PSAPL1	Q6NUJ1	521 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	CEP68	Q76N32	757 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	RHPN2	Q8IUC4	686 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	LMAN1L	Q9HAT1	526 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	CHST7	Q9NS84	486 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	FNIP2	Q9P278	1114 aa		13.19	□□□□□ -0.3
PAX6-238	ENST00000638755	CNTNAP2	Q9UHC6	1331 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	DSP	P15924	2871 aa	Known RBP	13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	IGLV3-22	A0A075B6J6	115 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	AXIN1	O15169	862 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	C1R	P00736	705 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	DNM2	P50570	870 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	CDC42EP1	Q00587	391 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	FOXC1	Q12948	553 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	UGCG	Q16739	394 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	USP41	Q3LFD5	358 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	LIN9	Q5TKA1	542 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	TYW1B	Q6NUM6	668 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	MAMSTR	Q6ZN01	415 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	MRPL10	Q7Z7H8	261 aa	Known RBP	13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	KSR1	Q8IVT5	923 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	NPAS3	Q8IXF0	933 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	ZNF687	Q8N1G0	1237 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	NLRP4	Q96MN2	994 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	SH2D3A	Q9BRG2	576 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	GPR62	Q9BZJ7	368 aa		13.18	□□□□□ -0.3
PAX6-238	ENST00000638755	ARRDC1-AS1	Q9H2J1	176 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms