RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.89	□□□□□ -0.51
STRADA-231	ENST00000638708	SAR1A	Q9NR31	198 aa		11.89	□□□□□ -0.51
STRADA-231	ENST00000638708	CCDC87	Q9NVE4	849 aa		11.89	□□□□□ -0.51
STRADA-231	ENST00000638708	MAD2L2	Q9UI95	211 aa		11.89	□□□□□ -0.51
STRADA-231	ENST00000638708	COMMD3-BMI1	R4GMX3	469 aa		11.89	□□□□□ -0.51
STRADA-231	ENST00000638708	USP17L12	C9JPN9	530 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	USP17L21	D6R901	530 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	ACSL3	O95573	720 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	TXK	P42681	527 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	SFSWAP	Q12872	951 aa	Known RBP	11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	CALCOCO2	Q13137	446 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	EPHA7	Q15375	998 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	CALCRL	Q16602	461 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	KHDC1	Q4VXA5	237 aa	Known RBP	11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	FAM47E	Q6ZV65	393 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	CCNJL	Q8IV13	435 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	PNMA1	Q8ND90	353 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	STKLD1	Q8NE28	680 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	SNX29	Q8TEQ0	813 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	C10orf82	Q8WW14	230 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	LZIC	Q8WZA0	190 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	SIX2	Q9NPC8	291 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	DDX43	Q9NXZ2	648 aa	Known RBP	11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	IL1RAPL1	Q9NZN1	696 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	BLOC1S6	Q9UL45	172 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	PCDHA2	Q9Y5H9	948 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	ROBO3	Q96MS0	1386 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	TSPY2	A6NKD2	308 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	SNAP23	O00161	211 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	MAP3K7	O43318	606 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	NT5C2	P49902	561 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	HADHB	P55084	474 aa	Known RBP	11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	CDR2	Q01850	454 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	MCL1	Q07820	350 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	MTA1	Q13330	715 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	LSAMP	Q13449	338 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	KRT79	Q5XKE5	535 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	C11orf63	Q6NUN7	778 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	KCNK18	Q7Z418	384 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	DGKH	Q86XP1	1220 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	SYCP3	Q8IZU3	236 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	UBL4B	Q8N7F7	174 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	CENPK	Q9BS16	269 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	FGFBP2	Q9BYJ0	223 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	C6orf50	Q9HD87	102 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	AAAS	Q9NRG9	546 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	WHRN	Q9P202	907 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	PHTF1	Q9UMS5	762 aa		11.88	□□□□□ -0.51
STRADA-231	ENST00000638708	TOGARAM1	Q9Y4F4	1720 aa		11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	CYTH3	O43739	400 aa		11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	PSMG1	O95456	288 aa		11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	CBX6	O95503	412 aa		11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	TPP2	P29144	1249 aa	Predicted RBP	11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	COIL	P38432	576 aa	Predicted RBP	11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	NAPA	P54920	295 aa		11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	C1QTNF12	Q5T7M4	302 aa		11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	SEL1L2	Q5TEA6	688 aa		11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	RFWD3	Q6PCD5	774 aa		11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	ZNF365	Q70YC5	407 aa		11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	CCDC65	Q8IXS2	484 aa		11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	C12orf50	Q8NA57	414 aa	Predicted RBP	11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	RBM17	Q96I25	401 aa	Known RBP	11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	OLFM3	Q96PB7	478 aa		11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	ZNF184	Q99676	751 aa	Predicted RBP	11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	GALNT8	Q9NY28	637 aa		11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	TMOD4	Q9NZQ9	345 aa		11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	ZNF212	Q9UDV6	495 aa		11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	SHANK3	Q9BYB0	1731 aa		11.87	□□□□□ -0.51
STRADA-231	ENST00000638708	FAM47DP	A6NHR8	397 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	KRT36	O76013	467 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	TTC4	O95801	387 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	LYN	P07948	512 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	MUT	P22033	750 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	GNA11	P29992	359 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	STAT1	P42224	750 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	SLC45A4	Q5BKX6	768 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	DAB2IP	Q5VWQ8	1189 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	RHBDF2	Q6PJF5	856 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	TBCK	Q8TEA7	893 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	SCFD1	Q8WVM8	642 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	MIPEP	Q99797	713 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	ZSWIM1	Q9BR11	485 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	LZTS2	Q9BRK4	669 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	MIS12	Q9H081	205 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	STX18	Q9P2W9	335 aa	Known RBP	11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	ABCF2	Q9UG63	623 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	CIDEB	Q9UHD4	219 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	TRMT112	Q9UI30	125 aa	Known RBP	11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	ZFP69B	Q9UJL9	534 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	ZNF804B	A4D1E1	1349 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	UMODL1	Q5DID0	1318 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	LAMB2	P55268	1798 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	CAPN9	O14815	690 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	EDF1	O60869	148 aa	Known RBP	11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	CDH16	O75309	829 aa		11.86	□□□□□ -0.51
STRADA-231	ENST00000638708	ASMTL	O95671	621 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms