RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 SMAD2Q15796 467 aaKnown RBP20.2■□□□□ 0.82
CLN6-210ENST00000635747 DDX53Q86TM3 631 aaKnown RBP20.2■□□□□ 0.82
CLN6-210ENST00000635747 GJD3Q8N144 294 aa20.2■□□□□ 0.82
CLN6-210ENST00000635747 MRPL43Q8N983 215 aaKnown RBP20.2■□□□□ 0.82
CLN6-210ENST00000635747 DEPTORQ8TB45 409 aa20.2■□□□□ 0.82
CLN6-210ENST00000635747 EIF2AQ9BY44 585 aaKnown RBP20.2■□□□□ 0.82
CLN6-210ENST00000635747 GBP3Q9H0R5 595 aa20.2■□□□□ 0.82
CLN6-210ENST00000635747 BMP15O95972 392 aa20.19■□□□□ 0.82
CLN6-210ENST00000635747 IL17AQ16552 155 aa20.19■□□□□ 0.82
CLN6-210ENST00000635747 TMEM184AQ6ZMB5 413 aa20.19■□□□□ 0.82
CLN6-210ENST00000635747 VPS52Q8N1B4 723 aa20.19■□□□□ 0.82
CLN6-210ENST00000635747 POP1Q99575 1024 aaKnown RBP20.19■□□□□ 0.82
CLN6-210ENST00000635747 NT5C3AQ9H0P0 336 aa20.19■□□□□ 0.82
CLN6-210ENST00000635747 CLEC1BQ9P126 229 aa20.19■□□□□ 0.82
CLN6-210ENST00000635747 FAN1Q9Y2M0 1017 aa20.19■□□□□ 0.82
CLN6-210ENST00000635747 ZMYM2Q9UBW7 1377 aa20.19■□□□□ 0.82
CLN6-210ENST00000635747 ATG2AQ2TAZ0 1938 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 ARL5CA6NH57 179 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 ACKR2O00590 384 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 N4BP3O15049 544 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 B4GALT5O43286 388 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 SLC26A4O43511 780 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 NR1I2O75469 434 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 CXCL14O95715 111 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 GLP2RO95838 553 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 POMCP01189 267 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 SSTR3P32745 418 aaPredicted RBP20.18■□□□□ 0.82
CLN6-210ENST00000635747 SLC11A1P49279 550 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 PRPF4BQ13523 1007 aaKnown RBP20.18■□□□□ 0.82
CLN6-210ENST00000635747 CLUL1Q15846 466 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 TMEM132AQ24JP5 1023 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 ZNF280BQ86YH2 543 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 ADHFE1Q8IWW8 467 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 TMEM87AQ8NBN3 555 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 SMRP1Q8NCR6 262 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 AK8Q96MA6 479 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 ADPGKQ9BRR6 497 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 TIPINQ9BVW5 301 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 C1QTNF1Q9BXJ1 281 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 DNAJB4Q9UDY4 337 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 KCNG1Q9UIX4 513 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 PHLPP2Q6ZVD8 1323 aa20.18■□□□□ 0.82
CLN6-210ENST00000635747 PP2D1A8MPX8 630 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 HIDE1A8MVS5 230 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 NPTXRO95502 500 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 PRKCBP05771 671 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 CTSAP10619 480 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 HOXB8P17481 243 aaPredicted RBP20.17■□□□□ 0.82
CLN6-210ENST00000635747 HYIQ5T013 277 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 BSNDQ8WZ55 320 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 CDK5RAP3Q96JB5 506 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 DRC1Q96MC2 740 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 GAD1Q99259 594 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 MMTAG2Q9BU76 263 aaKnown RBP20.17■□□□□ 0.82
CLN6-210ENST00000635747 ZBP1Q9H171 429 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 RNF39Q9H2S5 420 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 C17orf75Q9HAS0 396 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 BARX2Q9UMQ3 279 aaPredicted RBP20.17■□□□□ 0.82
CLN6-210ENST00000635747 HES2Q9Y543 173 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 IRAK3Q9Y616 596 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 C5orf42Q9H799 3197 aa20.17■□□□□ 0.82
CLN6-210ENST00000635747 VWA3AA6NCI4 1184 aa20.16■□□□□ 0.82
CLN6-210ENST00000635747 C2orf71A6NGG8 1288 aa20.16■□□□□ 0.82
CLN6-210ENST00000635747 E9PMD0 336 aa20.16■□□□□ 0.82
CLN6-210ENST00000635747 DDHD2O94830 711 aa20.16■□□□□ 0.82
CLN6-210ENST00000635747 CDC25AP30304 524 aa20.16■□□□□ 0.82
CLN6-210ENST00000635747 MLH1P40692 756 aa20.16■□□□□ 0.82
CLN6-210ENST00000635747 AFF1P51825 1210 aaKnown RBP20.16■□□□□ 0.82
CLN6-210ENST00000635747 ZP2Q05996 745 aa20.16■□□□□ 0.82
CLN6-210ENST00000635747 KCNC3Q14003 757 aa20.16■□□□□ 0.82
CLN6-210ENST00000635747 APBB1IPQ7Z5R6 666 aaPredicted RBP20.16■□□□□ 0.82
CLN6-210ENST00000635747 CASP10Q92851 521 aa20.16■□□□□ 0.82
CLN6-210ENST00000635747 INTS4Q96HW7 963 aaKnown RBP20.16■□□□□ 0.82
CLN6-210ENST00000635747 APOL6Q9BWW8 343 aa20.16■□□□□ 0.82
CLN6-210ENST00000635747 CCDC113Q9H0I3 377 aa20.16■□□□□ 0.82
CLN6-210ENST00000635747 NXF3Q9H4D5 531 aaKnown RBP20.16■□□□□ 0.82
CLN6-210ENST00000635747 NRP1O14786 923 aa20.15■□□□□ 0.82
CLN6-210ENST00000635747 CA8P35219 290 aa20.15■□□□□ 0.82
CLN6-210ENST00000635747 TMEM173Q86WV6 379 aaPredicted RBP20.15■□□□□ 0.82
CLN6-210ENST00000635747 KCND2Q9NZV8 630 aa20.15■□□□□ 0.82
CLN6-210ENST00000635747 PARP2Q9UGN5 583 aa20.15■□□□□ 0.82
CLN6-210ENST00000635747 RBM19Q9Y4C8 960 aaKnown RBP20.15■□□□□ 0.82
CLN6-210ENST00000635747 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.14■□□□□ 0.81
CLN6-210ENST00000635747 VPS37CA5D8V6 355 aaPredicted RBP20.14■□□□□ 0.81
CLN6-210ENST00000635747 C19orf67A6NJJ6 358 aa20.14■□□□□ 0.81
CLN6-210ENST00000635747 K7ERI5 159 aa20.14■□□□□ 0.81
CLN6-210ENST00000635747 AKAP5P24588 427 aa20.14■□□□□ 0.81
CLN6-210ENST00000635747 SCNN1GP51170 649 aa20.14■□□□□ 0.81
CLN6-210ENST00000635747 DSC1Q08554 894 aa20.14■□□□□ 0.81
CLN6-210ENST00000635747 DMP1Q13316 513 aaPredicted RBP20.14■□□□□ 0.81
CLN6-210ENST00000635747 ZRSR1Q15695 479 aaKnown RBP20.14■□□□□ 0.81
CLN6-210ENST00000635747 RINT1Q6NUQ1 792 aa20.14■□□□□ 0.81
CLN6-210ENST00000635747 ANKRD54Q6NXT1 300 aa20.14■□□□□ 0.81
CLN6-210ENST00000635747 CDR2LQ86X02 465 aaPredicted RBP20.14■□□□□ 0.81
CLN6-210ENST00000635747 COLGALT2Q8IYK4 626 aa20.14■□□□□ 0.81
CLN6-210ENST00000635747 VN1R2Q8NFZ6 395 aa20.14■□□□□ 0.81
CLN6-210ENST00000635747 ZFP42Q96MM3 310 aa20.14■□□□□ 0.81
CLN6-210ENST00000635747 RPS6KC1Q96S38 1066 aa20.14■□□□□ 0.81
CLN6-210ENST00000635747 PDZD7Q9H5P4 517 aa20.14■□□□□ 0.81
CLN6-210ENST00000635747 CD320Q9NPF0 282 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms