RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 EMC7Q9NPA0 242 aa4.44□□□□□ -1.7
PTP4A2-220ENST00000627328 ING3Q9NXR8 418 aa4.44□□□□□ -1.7
PTP4A2-220ENST00000627328 TRPS1Q9UHF7 1281 aa4.44□□□□□ -1.7
PTP4A2-220ENST00000627328 USP18Q9UMW8 372 aa4.44□□□□□ -1.7
PTP4A2-220ENST00000627328 REXO2Q9Y3B8 237 aaKnown RBP4.44□□□□□ -1.7
PTP4A2-220ENST00000627328 A0A087X0B3 334 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 PRSS38A1L453 326 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 TMEM191CA6NGB0 347 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 TRIM24O15164 1050 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 PDE8AO60658 829 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 ULK1O75385 1050 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 GYPEP15421 78 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 GZMKP49863 264 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 MANFP55145 182 aaKnown RBP4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 SLC25A3Q00325 362 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 DUSP2Q05923 314 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 C19orf54Q5BKX5 351 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 BROXQ5VW32 411 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 C1QL3Q5VWW1 255 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 PIK3C3Q8NEB9 887 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 OR5M3Q8NGP4 307 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 SLC5A5Q92911 643 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 CLIP3Q96DZ5 547 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 IL17RAQ96F46 866 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 PRSS50Q9UI38 385 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 TMPRSS11EQ9UL52 423 aa4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 NOC2LQ9Y3T9 749 aaKnown RBP4.43□□□□□ -1.7
PTP4A2-220ENST00000627328 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 KDM1AO60341 852 aa4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 DNAJC6O75061 913 aa4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 GASTP01350 101 aa4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 LTA4HP09960 611 aaKnown RBP4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 MYCLP1P12525 358 aaPredicted RBP4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 BPIP17213 487 aa4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 PPARAQ07869 468 aa4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 MRPL49Q13405 166 aaKnown RBP4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 ATP13A4Q4VNC1 1196 aa4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 ZNF362Q5T0B9 420 aaPredicted RBP4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 SYNE4Q8N205 404 aa4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 ZNF276Q8N554 614 aa4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 LEO1Q8WVC0 666 aaPredicted RBP4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 USP7Q93009 1102 aa4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 CPPED1Q9BRF8 314 aaPredicted RBP4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 FDXACB1Q9BRP7 624 aaPredicted RBP4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 EPC1Q9H2F5 836 aa4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 IFT22Q9H7X7 185 aa4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 SLC2A4RGQ9NR83 387 aa4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 GPRC5BQ9NZH0 403 aa4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 HDAC5Q9UQL6 1122 aa4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 PPP2R3BQ9Y5P8 575 aa4.42□□□□□ -1.7
PTP4A2-220ENST00000627328 GRXCR1A8MXD5 290 aa4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 INO80B-WBP1J3KQ70 363 aa4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 SESN3P58005 492 aa4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 MGAT5Q09328 741 aa4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 VPS72Q15906 364 aa4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 DRICH1Q6PGQ1 229 aaPredicted RBP4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 DDX46Q7L014 1031 aaKnown RBP4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 RHOUQ7L0Q8 258 aa4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 SLC41A1Q8IVJ1 513 aa4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 MB21D1Q8N884 522 aa4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 OR52N2Q8NGI0 321 aa4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 ZNF764Q96H86 408 aaPredicted RBP4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 ACAP3Q96P50 834 aa4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 TTC1Q99614 292 aa4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 INO80BQ9C086 356 aaPredicted RBP4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 SLKQ9H2G2 1235 aaPredicted RBP4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 TMX1Q9H3N1 280 aa4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 FZD1Q9UP38 647 aa4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 TBX22Q9Y458 520 aa4.41□□□□□ -1.7
PTP4A2-220ENST00000627328 B5MCH6 92 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 RHOBTB3O94955 611 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 ITGB1P05556 798 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 HSP90B1P14625 803 aaKnown RBP4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 MGAT1P26572 445 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 CASRP41180 1078 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 GYS2P54840 703 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 FAPQ12884 760 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 UBE3CQ15386 1083 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 PDZD4Q76G19 769 aaPredicted RBP4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 MRGPREQ86SM8 312 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 LYSMD2Q8IV50 215 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 RAX2Q96IS3 184 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 FAM193BQ96PV7 902 aaPredicted RBP4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 DCLRE1CQ96SD1 692 aaKnown RBP4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 SLC46A2Q9BY10 475 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 ANO3Q9BYT9 981 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 NRDE2Q9H7Z3 1164 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 ADARB2Q9NS39 739 aaKnown RBP4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 PTGFRNQ9P2B2 879 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 EVLQ9UI08 416 aaPredicted RBP4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 APOBEC2Q9Y235 224 aaKnown RBP4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 CDY2AQ9Y6F7 541 aa4.4□□□□□ -1.71
PTP4A2-220ENST00000627328 TLDC2A0PJX2 215 aa4.39□□□□□ -1.71
PTP4A2-220ENST00000627328 GAGE12BA1L429 117 aa4.39□□□□□ -1.71
PTP4A2-220ENST00000627328 GAGE12HA6NDE8 117 aa4.39□□□□□ -1.71
PTP4A2-220ENST00000627328 PRR5-ARHGAP8B1AHC4 643 aa4.39□□□□□ -1.71
PTP4A2-220ENST00000627328 DIRC3C9JPN6 131 aa4.39□□□□□ -1.71
PTP4A2-220ENST00000627328 BRINP1O60477 761 aa4.39□□□□□ -1.71
PTP4A2-220ENST00000627328 PHF2O75151 1096 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms