RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 MTM1Q13496 603 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 CTTNQ14247 550 aaKnown RBP7.46□□□□□ -1.22
NEDD9-216ENST00000620854 TMEM119Q4V9L6 283 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 C2CD6Q53TS8 623 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 GPATCH4Q5T3I0 446 aaKnown RBP7.46□□□□□ -1.22
NEDD9-216ENST00000620854 STYK1Q6J9G0 422 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 TTC27Q6P3X3 843 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 PIGWQ7Z7B1 504 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 CCDC125Q86Z20 511 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 TPH2Q8IWU9 490 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 C1orf131Q8NDD1 294 aaKnown RBP7.46□□□□□ -1.22
NEDD9-216ENST00000620854 PARD3BQ8TEW8 1205 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 ATG4AQ8WYN0 398 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 SLC35C1Q96A29 364 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 RMDN2Q96LZ7 410 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 SMC6Q96SB8 1091 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 RUSC1Q9BVN2 902 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 JMJD4Q9H9V9 463 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 SUGT1Q9Y2Z0 365 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 USP15Q9Y4E8 981 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-216ENST00000620854 RPTORQ8N122 1335 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 ARHGEF35A5YM69 484 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 FOXN3O00409 490 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-216ENST00000620854 SPAG7O75391 227 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 PIAS1O75925 651 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 GDF11O95390 407 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 BRAFP15056 766 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 HOXA13P31271 388 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-216ENST00000620854 HOXD13P35453 343 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 ATP11AP98196 1134 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 AUHQ13825 339 aaKnown RBP7.46□□□□□ -1.22
NEDD9-216ENST00000620854 CYP4F22Q6NT55 531 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 PRUNE1Q86TP1 453 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 ZDHHC14Q8IZN3 488 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 TAB3Q8N5C8 712 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-216ENST00000620854 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.46□□□□□ -1.22
NEDD9-216ENST00000620854 ZDHHC18Q9NUE0 388 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 ZMYND8Q9ULU4 1186 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-216ENST00000620854 PCDHA1Q9Y5I3 950 aa7.46□□□□□ -1.22
NEDD9-216ENST00000620854 CICQ96RK0 1608 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-216ENST00000620854 PPP1R12AO14974 1030 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-216ENST00000620854 RTN2O75298 545 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 CALCAP01258 141 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 IFNB1P01574 187 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 PAEPP09466 180 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 DLATP10515 647 aaKnown RBP7.45□□□□□ -1.22
NEDD9-216ENST00000620854 MSH2P43246 934 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 EPHA7Q15375 998 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 CNGA2Q16280 664 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 CBWD6Q4V339 395 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 CBWD3Q5JTY5 395 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 CBWD5Q5RIA9 395 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 C10orf76Q5T2E6 689 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 DAB2IPQ5VWQ8 1189 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 ZDHHC24Q6UX98 284 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 FAM186BQ8IYM0 893 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 PRELID2Q8N945 189 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 ARMC2Q8NEN0 867 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 SPDYE1Q8NFV5 336 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-216ENST00000620854 NEDD1Q8NHV4 660 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 RFFLQ8WZ73 363 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 SAAL1Q96ER3 474 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 HOMER3Q9NSC5 361 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 SLC12A4Q9UP95 1085 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 PCDHA2Q9Y5H9 948 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 SLIT2O94813 1529 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 COL4A1P02462 1669 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 DDX3YO15523 660 aaKnown RBP7.45□□□□□ -1.22
NEDD9-216ENST00000620854 PYGMP11217 842 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 KRT15P19012 456 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 TARSP26639 723 aaKnown RBP7.45□□□□□ -1.22
NEDD9-216ENST00000620854 COPS2P61201 443 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 POU5F1Q01860 360 aaKnown RBP7.45□□□□□ -1.22
NEDD9-216ENST00000620854 GIT2Q14161 759 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 SHROOM1Q2M3G4 852 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-216ENST00000620854 SUPT20HL1Q3ZLR7 823 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 COBLL1Q53SF7 1204 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 ANKRD20A2Q5SQ80 823 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 ANKRD20A1Q5TYW2 823 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 ANKRD20A3Q5VUR7 823 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 TAOK1Q7L7X3 1001 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 LONP2Q86WA8 852 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 SPOCK2Q92563 424 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 C9orf72Q96LT7 481 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 TGS1Q96RS0 853 aaKnown RBP7.45□□□□□ -1.22
NEDD9-216ENST00000620854 FNBP1Q96RU3 617 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 NAP1L3Q99457 506 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-216ENST00000620854 HEMGNQ9BXL5 484 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 ZCWPW1Q9H0M4 648 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 UBE2TQ9NPD8 197 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-216ENST00000620854 LRRC4BQ9NT99 713 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 ASAP2O43150 1006 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 RIPK2O43353 540 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 CALUO43852 315 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-216ENST00000620854 GHRP10912 638 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 COMTP21964 271 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 SOX5P35711 763 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 ZNF131P52739 623 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 MPP2Q14168 576 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 ASPRV1Q53RT3 343 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms