RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 AGGF1Q8N302 714 aaeCLIP16.72■□□□□ 0.27
GPN1-212ENST00000616939 FITM2Q8N6M3 262 aa16.72■□□□□ 0.27
GPN1-212ENST00000616939 MARCH10Q8NA82 808 aaPredicted RBP16.72■□□□□ 0.27
GPN1-212ENST00000616939 FBF1Q8TES7 1133 aa16.72■□□□□ 0.27
GPN1-212ENST00000616939 LENG9Q96B70 501 aa16.72■□□□□ 0.27
GPN1-212ENST00000616939 RUSC1Q9BVN2 902 aa16.72■□□□□ 0.27
GPN1-212ENST00000616939 CCDC113Q9H0I3 377 aa16.72■□□□□ 0.27
GPN1-212ENST00000616939 AAASQ9NRG9 546 aa16.72■□□□□ 0.27
GPN1-212ENST00000616939 KLHL14Q9P2G3 628 aa16.72■□□□□ 0.27
GPN1-212ENST00000616939 RTCBQ9Y3I0 505 aaKnown RBP16.72■□□□□ 0.27
GPN1-212ENST00000616939 P4HA2O15460 535 aa16.71■□□□□ 0.27
GPN1-212ENST00000616939 UNC5CO95185 931 aa16.71■□□□□ 0.27
GPN1-212ENST00000616939 BCRP11274 1271 aa16.71■□□□□ 0.27
GPN1-212ENST00000616939 GZMAP12544 262 aa16.71■□□□□ 0.27
GPN1-212ENST00000616939 ITIH2P19823 946 aa16.71■□□□□ 0.27
GPN1-212ENST00000616939 SPDYAQ5MJ70 313 aa16.71■□□□□ 0.27
GPN1-212ENST00000616939 RC3H1Q5TC82 1133 aaKnown RBP16.71■□□□□ 0.27
GPN1-212ENST00000616939 ARHGEF18Q6ZSZ5 1173 aa16.71■□□□□ 0.27
GPN1-212ENST00000616939 CCDC105Q8IYK2 499 aa16.71■□□□□ 0.27
GPN1-212ENST00000616939 SPDL1Q96EA4 605 aa16.71■□□□□ 0.27
GPN1-212ENST00000616939 TMEM237Q96Q45 408 aa16.71■□□□□ 0.27
GPN1-212ENST00000616939 LRMDAQ9H2I8 198 aa16.71■□□□□ 0.27
GPN1-212ENST00000616939 ANKIB1Q9P2G1 1089 aa16.71■□□□□ 0.27
GPN1-212ENST00000616939 VAV3Q9UKW4 847 aa16.71■□□□□ 0.27
GPN1-212ENST00000616939 USP20Q9Y2K6 914 aa16.71■□□□□ 0.27
GPN1-212ENST00000616939 RABGAP1Q9Y3P9 1069 aa16.71■□□□□ 0.27
GPN1-212ENST00000616939 ECM2O94769 699 aaPredicted RBP16.7■□□□□ 0.26
GPN1-212ENST00000616939 FAM13AO94988 1023 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 FOSP01100 380 aaPredicted RBP16.7■□□□□ 0.26
GPN1-212ENST00000616939 COMTP21964 271 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 GCKP35557 465 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 MARCKSL1P49006 195 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 STRN3Q13033 797 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 QRICH1Q2TAL8 776 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 CCDC38Q502W7 563 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 NAIF1Q69YI7 327 aaPredicted RBP16.7■□□□□ 0.26
GPN1-212ENST00000616939 RINT1Q6NUQ1 792 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 AADACL2Q6P093 401 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 PPP1R21Q6ZMI0 780 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 PALB2Q86YC2 1186 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 KIRREL3Q8IZU9 778 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 LMO3Q8TAP4 145 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 MAIP1Q8WWC4 291 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 PRCCQ92733 491 aaPredicted RBP16.7■□□□□ 0.26
GPN1-212ENST00000616939 INPP5DQ92835 1189 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 SAAL1Q96ER3 474 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 SLC24A3Q9HC58 644 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 CD209Q9NNX6 404 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 FRMD4BQ9Y2L6 1034 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 ZNFX1Q9P2E3 1918 aaKnown RBP16.7■□□□□ 0.26
GPN1-212ENST00000616939 ZNF536O15090 1300 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 USP17L15C9J2P7 530 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 USP17L13C9JLJ4 530 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 USP17L11C9JVI0 530 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 USP17L18D6R9N7 530 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 USP17L22D6RA61 530 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 USP17L17D6RBQ6 530 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 USP17L19D6RCP7 530 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 USP17L20D6RJB6 530 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 FSCN2O14926 492 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 TTC4O95801 387 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 MUTP22033 750 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 SREBF1P36956 1147 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 USP17L24Q0WX57 530 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 PTK6Q13882 451 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 CBWD6Q4V339 395 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 CBWD3Q5JTY5 395 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 CBWD5Q5RIA9 395 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 CGB2Q6NT52 195 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 USP17L6PQ6QN14 398 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 HS2ST1Q7LGA3 356 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 SPICE1Q8N0Z3 855 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 RIBC1Q8N443 379 aaPredicted RBP16.7■□□□□ 0.26
GPN1-212ENST00000616939 UHMK1Q8TAS1 419 aaKnown RBP16.7■□□□□ 0.26
GPN1-212ENST00000616939 ZNF483Q8TF39 744 aaPredicted RBP16.7■□□□□ 0.26
GPN1-212ENST00000616939 TMEM174Q8WUU8 243 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 DCAF4Q8WV16 495 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 TGS1Q96RS0 853 aaKnown RBP16.7■□□□□ 0.26
GPN1-212ENST00000616939 TUFT1Q9NNX1 390 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 SPATS2LQ9NUQ6 558 aaKnown RBP16.7■□□□□ 0.26
GPN1-212ENST00000616939 PNMA3Q9UL41 463 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 LRRC42Q9Y546 428 aa16.7■□□□□ 0.26
GPN1-212ENST00000616939 MEIS1O00470 390 aa16.69■□□□□ 0.26
GPN1-212ENST00000616939 MEIS2O14770 477 aa16.69■□□□□ 0.26
GPN1-212ENST00000616939 MAGEB2O15479 319 aa16.69■□□□□ 0.26
GPN1-212ENST00000616939 SORBS3O60504 671 aa16.69■□□□□ 0.26
GPN1-212ENST00000616939 FTLP02792 175 aaPredicted RBP16.69■□□□□ 0.26
GPN1-212ENST00000616939 PYGMP11217 842 aa16.69■□□□□ 0.26
GPN1-212ENST00000616939 GNAZP19086 355 aa16.69■□□□□ 0.26
GPN1-212ENST00000616939 LONRF1Q17RB8 773 aa16.69■□□□□ 0.26
GPN1-212ENST00000616939 KCTD19Q17RG1 926 aaPredicted RBP16.69■□□□□ 0.26
GPN1-212ENST00000616939 RNF207Q6ZRF8 634 aa16.69■□□□□ 0.26
GPN1-212ENST00000616939 RELL1Q8IUW5 271 aa16.69■□□□□ 0.26
GPN1-212ENST00000616939 BHMT2Q9H2M3 363 aa16.69■□□□□ 0.26
GPN1-212ENST00000616939 LRRC37AA6NMS7 1700 aa16.68■□□□□ 0.26
GPN1-212ENST00000616939 A8MUI8 341 aa16.68■□□□□ 0.26
GPN1-212ENST00000616939 FOXN3O00409 490 aaPredicted RBP16.68■□□□□ 0.26
GPN1-212ENST00000616939 TP73O15350 636 aa16.68■□□□□ 0.26
GPN1-212ENST00000616939 CYP1A2P05177 515 aa16.68■□□□□ 0.26
GPN1-212ENST00000616939 ATP2B4P23634 1241 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms