RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 DDHD2O94830 711 aa28.83■■■□□ 2.21
PNKP-216ENST00000601816 CA8P35219 290 aa28.83■■■□□ 2.21
PNKP-216ENST00000601816 DTHD1Q6ZMT9 781 aa28.83■■■□□ 2.21
PNKP-216ENST00000601816 PPP4R3CPQ6ZMV5 832 aa28.83■■■□□ 2.21
PNKP-216ENST00000601816 DDX53Q86TM3 631 aaKnown RBP28.83■■■□□ 2.21
PNKP-216ENST00000601816 BCL7CQ8WUZ0 217 aaPredicted RBP28.83■■■□□ 2.21
PNKP-216ENST00000601816 PRIMPOLQ96LW4 560 aa28.83■■■□□ 2.21
PNKP-216ENST00000601816 TMEM175Q9BSA9 504 aa28.83■■■□□ 2.21
PNKP-216ENST00000601816 APOL6Q9BWW8 343 aa28.83■■■□□ 2.21
PNKP-216ENST00000601816 DDX19AQ9NUU7 478 aaKnown RBP28.83■■■□□ 2.21
PNKP-216ENST00000601816 C2orf71A6NGG8 1288 aa28.82■■■□□ 2.2
PNKP-216ENST00000601816 C19orf67A6NJJ6 358 aa28.82■■■□□ 2.2
PNKP-216ENST00000601816 KCNC3Q14003 757 aa28.82■■■□□ 2.2
PNKP-216ENST00000601816 KRT79Q5XKE5 535 aa28.82■■■□□ 2.2
PNKP-216ENST00000601816 LLGL2Q6P1M3 1020 aa28.82■■■□□ 2.2
PNKP-216ENST00000601816 SLC27A1Q6PCB7 646 aa28.82■■■□□ 2.2
PNKP-216ENST00000601816 TMEM184AQ6ZMB5 413 aa28.82■■■□□ 2.2
PNKP-216ENST00000601816 BSNDQ8WZ55 320 aa28.82■■■□□ 2.2
PNKP-216ENST00000601816 GAD1Q99259 594 aa28.82■■■□□ 2.2
PNKP-216ENST00000601816 ZBP1Q9H171 429 aa28.82■■■□□ 2.2
PNKP-216ENST00000601816 RNF39Q9H2S5 420 aa28.82■■■□□ 2.2
PNKP-216ENST00000601816 NXF3Q9H4D5 531 aaKnown RBP28.82■■■□□ 2.2
PNKP-216ENST00000601816 USP15Q9Y4E8 981 aaPredicted RBP28.82■■■□□ 2.2
PNKP-216ENST00000601816 A0A1B0GUA9 196 aa28.81■■■□□ 2.2
PNKP-216ENST00000601816 ARL5CA6NH57 179 aa28.81■■■□□ 2.2
PNKP-216ENST00000601816 INPPL1O15357 1258 aa28.81■■■□□ 2.2
PNKP-216ENST00000601816 NPTXRO95502 500 aa28.81■■■□□ 2.2
PNKP-216ENST00000601816 CXCL14O95715 111 aa28.81■■■□□ 2.2
PNKP-216ENST00000601816 MLH1P40692 756 aa28.81■■■□□ 2.2
PNKP-216ENST00000601816 NAMPTP43490 491 aa28.81■■■□□ 2.2
PNKP-216ENST00000601816 PPP2R5AQ15172 486 aa28.81■■■□□ 2.2
PNKP-216ENST00000601816 IL17AQ16552 155 aa28.81■■■□□ 2.2
PNKP-216ENST00000601816 CDR2LQ86X02 465 aaPredicted RBP28.81■■■□□ 2.2
PNKP-216ENST00000601816 DEPTORQ8TB45 409 aa28.81■■■□□ 2.2
PNKP-216ENST00000601816 PP2D1A8MPX8 630 aa28.8■■■□□ 2.2
PNKP-216ENST00000601816 PI4K2BG5E9Z4 385 aa28.8■■■□□ 2.2
PNKP-216ENST00000601816 ALDH2P05091 517 aa28.8■■■□□ 2.2
PNKP-216ENST00000601816 CTSAP10619 480 aa28.8■■■□□ 2.2
PNKP-216ENST00000601816 FAM187BQ17R55 369 aa28.8■■■□□ 2.2
PNKP-216ENST00000601816 FZD8Q9H461 694 aa28.8■■■□□ 2.2
PNKP-216ENST00000601816 FAN1Q9Y2M0 1017 aa28.8■■■□□ 2.2
PNKP-216ENST00000601816 GIT1Q9Y2X7 761 aa28.8■■■□□ 2.2
PNKP-216ENST00000601816 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.79■■■□□ 2.2
PNKP-216ENST00000601816 ATP2C1P98194 919 aaPredicted RBP28.79■■■□□ 2.2
PNKP-216ENST00000601816 GIT2Q14161 759 aa28.79■■■□□ 2.2
PNKP-216ENST00000601816 MAPK6Q16659 721 aa28.79■■■□□ 2.2
PNKP-216ENST00000601816 ANKRD54Q6NXT1 300 aa28.79■■■□□ 2.2
PNKP-216ENST00000601816 TMEM87AQ8NBN3 555 aa28.79■■■□□ 2.2
PNKP-216ENST00000601816 AUTS2Q8WXX7 1259 aa28.79■■■□□ 2.2
PNKP-216ENST00000601816 KIFAP3Q92845 792 aa28.79■■■□□ 2.2
PNKP-216ENST00000601816 CASP10Q92851 521 aa28.79■■■□□ 2.2
PNKP-216ENST00000601816 IFT74Q96LB3 600 aa28.79■■■□□ 2.2
PNKP-216ENST00000601816 ZFP42Q96MM3 310 aa28.79■■■□□ 2.2
PNKP-216ENST00000601816 STK39Q9UEW8 545 aa28.79■■■□□ 2.2
PNKP-216ENST00000601816 DNM3Q9UQ16 869 aa28.79■■■□□ 2.2
PNKP-216ENST00000601816 NRP1O14786 923 aa28.78■■■□□ 2.2
PNKP-216ENST00000601816 CLASP2O75122 1294 aaKnown RBP28.78■■■□□ 2.2
PNKP-216ENST00000601816 SCNN1GP51170 649 aa28.78■■■□□ 2.2
PNKP-216ENST00000601816 TMEM132AQ24JP5 1023 aa28.78■■■□□ 2.2
PNKP-216ENST00000601816 LARP1BQ659C4 914 aaKnown RBP28.78■■■□□ 2.2
PNKP-216ENST00000601816 HCFC2Q9Y5Z7 792 aa28.78■■■□□ 2.2
PNKP-216ENST00000601816 N4BP3O15049 544 aa28.77■■■□□ 2.2
PNKP-216ENST00000601816 PRKCBP05771 671 aa28.77■■■□□ 2.2
PNKP-216ENST00000601816 LIG1P18858 919 aa28.77■■■□□ 2.2
PNKP-216ENST00000601816 CDC25AP30304 524 aa28.77■■■□□ 2.2
PNKP-216ENST00000601816 PRPF4BQ13523 1007 aaKnown RBP28.77■■■□□ 2.2
PNKP-216ENST00000601816 COLGALT2Q8IYK4 626 aa28.77■■■□□ 2.2
PNKP-216ENST00000601816 VN1R3Q9BXE9 311 aa28.77■■■□□ 2.2
PNKP-216ENST00000601816 CCDC113Q9H0I3 377 aa28.77■■■□□ 2.2
PNKP-216ENST00000601816 POLD4Q9HCU8 107 aa28.77■■■□□ 2.2
PNKP-216ENST00000601816 IRAK3Q9Y616 596 aa28.77■■■□□ 2.2
PNKP-216ENST00000601816 E9PMD0 336 aa28.76■■■□□ 2.19
PNKP-216ENST00000601816 ALADP13716 330 aa28.76■■■□□ 2.19
PNKP-216ENST00000601816 HOXB8P17481 243 aaPredicted RBP28.76■■■□□ 2.19
PNKP-216ENST00000601816 AKAP5P24588 427 aa28.76■■■□□ 2.19
PNKP-216ENST00000601816 OR1G1P47890 313 aa28.76■■■□□ 2.19
PNKP-216ENST00000601816 MMTAG2Q9BU76 263 aaKnown RBP28.76■■■□□ 2.19
PNKP-216ENST00000601816 KIFC3Q9BVG8 833 aa28.76■■■□□ 2.19
PNKP-216ENST00000601816 MIOSQ9NXC5 875 aa28.76■■■□□ 2.19
PNKP-216ENST00000601816 PARP2Q9UGN5 583 aa28.76■■■□□ 2.19
PNKP-216ENST00000601816 PRG3Q9Y2Y8 225 aaPredicted RBP28.76■■■□□ 2.19
PNKP-216ENST00000601816 ZMYM2Q9UBW7 1377 aa28.75■■■□□ 2.19
PNKP-216ENST00000601816 ACKR2O00590 384 aa28.75■■■□□ 2.19
PNKP-216ENST00000601816 EFNA5P52803 228 aa28.75■■■□□ 2.19
PNKP-216ENST00000601816 DSC1Q08554 894 aa28.75■■■□□ 2.19
PNKP-216ENST00000601816 TMEM31Q5JXX7 168 aa28.75■■■□□ 2.19
PNKP-216ENST00000601816 SYCE2Q6PIF2 218 aa28.75■■■□□ 2.19
PNKP-216ENST00000601816 SUSD6Q92537 303 aa28.75■■■□□ 2.19
PNKP-216ENST00000601816 S1PR5Q9H228 398 aa28.75■■■□□ 2.19
PNKP-216ENST00000601816 PDZD7Q9H5P4 517 aa28.75■■■□□ 2.19
PNKP-216ENST00000601816 TTLL13PA6NNM8 815 aa28.74■■■□□ 2.19
PNKP-216ENST00000601816 DCXO43602 365 aa28.74■■■□□ 2.19
PNKP-216ENST00000601816 NR1I2O75469 434 aa28.74■■■□□ 2.19
PNKP-216ENST00000601816 COL9A1P20849 921 aa28.74■■■□□ 2.19
PNKP-216ENST00000601816 PTPN14Q15678 1187 aa28.74■■■□□ 2.19
PNKP-216ENST00000601816 ZRSR1Q15695 479 aaKnown RBP28.74■■■□□ 2.19
PNKP-216ENST00000601816 TPRNQ4KMQ1 711 aa28.74■■■□□ 2.19
PNKP-216ENST00000601816 RPS6KC1Q96S38 1066 aa28.74■■■□□ 2.19
PNKP-216ENST00000601816 ADPGKQ9BRR6 497 aa28.74■■■□□ 2.19
PNKP-216ENST00000601816 APOL5Q9BWW9 433 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms