RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 LIG1P18858 919 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 MLH1P40692 756 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 NAMPTP43490 491 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 ALDH7A1P49419 539 aaKnown RBP16.81■□□□□ 0.28
ERCC1-209ENST00000589214 AFF1P51825 1210 aaKnown RBP16.81■□□□□ 0.28
ERCC1-209ENST00000589214 KRT17Q04695 432 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 EFHBQ8N7U6 833 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 CNNM3Q8NE01 707 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 TMEM169Q96HH4 297 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 CDK5RAP3Q96JB5 506 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 KIFC3Q9BVG8 833 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 C2orf40Q9H1Z8 148 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 NXF3Q9H4D5 531 aaKnown RBP16.81■□□□□ 0.28
ERCC1-209ENST00000589214 TLE6Q9H808 572 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 PRMT7Q9NVM4 692 aaPredicted RBP16.81■□□□□ 0.28
ERCC1-209ENST00000589214 DNAJB4Q9UDY4 337 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 F13A1P00488 732 aa16.8■□□□□ 0.28
ERCC1-209ENST00000589214 POMCP01189 267 aa16.8■□□□□ 0.28
ERCC1-209ENST00000589214 CA8P35219 290 aa16.8■□□□□ 0.28
ERCC1-209ENST00000589214 LONP1P36776 959 aaKnown RBP16.8■□□□□ 0.28
ERCC1-209ENST00000589214 UBA7P41226 1012 aa16.8■□□□□ 0.28
ERCC1-209ENST00000589214 SLC11A1P49279 550 aa16.8■□□□□ 0.28
ERCC1-209ENST00000589214 ADAM15Q13444 863 aa16.8■□□□□ 0.28
ERCC1-209ENST00000589214 PPP2R5AQ15172 486 aa16.8■□□□□ 0.28
ERCC1-209ENST00000589214 TMEM132AQ24JP5 1023 aa16.8■□□□□ 0.28
ERCC1-209ENST00000589214 HYIQ5T013 277 aa16.8■□□□□ 0.28
ERCC1-209ENST00000589214 PDE12Q6L8Q7 609 aaKnown RBP16.8■□□□□ 0.28
ERCC1-209ENST00000589214 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
ERCC1-209ENST00000589214 USP49Q70CQ1 688 aa16.8■□□□□ 0.28
ERCC1-209ENST00000589214 ZNF280BQ86YH2 543 aa16.8■□□□□ 0.28
ERCC1-209ENST00000589214 BCL7CQ8WUZ0 217 aaPredicted RBP16.8■□□□□ 0.28
ERCC1-209ENST00000589214 AK8Q96MA6 479 aa16.8■□□□□ 0.28
ERCC1-209ENST00000589214 RNF39Q9H2S5 420 aa16.8■□□□□ 0.28
ERCC1-209ENST00000589214 FBXO2Q9UK22 296 aaPredicted RBP16.8■□□□□ 0.28
ERCC1-209ENST00000589214 BARX2Q9UMQ3 279 aaPredicted RBP16.8■□□□□ 0.28
ERCC1-209ENST00000589214 CUL9Q8IWT3 2517 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 GRXCR2A6NFK2 248 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 DDHD2O94830 711 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 GLP2RO95838 553 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 PRKCBP05771 671 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 RBM10P98175 930 aaKnown RBP16.79■□□□□ 0.28
ERCC1-209ENST00000589214 RAD51AP2Q09MP3 1159 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 KARSQ15046 597 aaKnown RBP16.79■□□□□ 0.28
ERCC1-209ENST00000589214 MAPK6Q16659 721 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 DUSP6Q16828 381 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 PUS10Q3MIT2 529 aaKnown RBP16.79■□□□□ 0.28
ERCC1-209ENST00000589214 TMEM119Q4V9L6 283 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 SLC27A1Q6PCB7 646 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 TMC7Q7Z402 723 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 HACE1Q8IYU2 909 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 LRRC15Q8TF66 581 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 KIFAP3Q92845 792 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 EPSTI1Q96J88 318 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 IFT74Q96LB3 600 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 PRIMPOLQ96LW4 560 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 FAM193BQ96PV7 902 aaPredicted RBP16.79■□□□□ 0.28
ERCC1-209ENST00000589214 GAD1Q99259 594 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 RUSC1Q9BVN2 902 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 CCDC113Q9H0I3 377 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 CD207Q9UJ71 328 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 USP20Q9Y2K6 914 aa16.79■□□□□ 0.28
ERCC1-209ENST00000589214 SRPRBQ9Y5M8 271 aaKnown RBP16.79■□□□□ 0.28
ERCC1-209ENST00000589214 TDRD15B5MCY1 1934 aaKnown RBP16.78■□□□□ 0.28
ERCC1-209ENST00000589214 TTLL13PA6NNM8 815 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 HIDE1A8MVS5 230 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 EDN1P05305 212 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 GALTP07902 379 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 SCNN1GP51170 649 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 PRPF4BQ13523 1007 aaKnown RBP16.78■□□□□ 0.28
ERCC1-209ENST00000589214 DHX8Q14562 1220 aaKnown RBP16.78■□□□□ 0.28
ERCC1-209ENST00000589214 SMC1AQ14683 1233 aaKnown RBP16.78■□□□□ 0.28
ERCC1-209ENST00000589214 SLC39A14Q15043 492 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 STK38Q15208 465 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 FAM187BQ17R55 369 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 RINT1Q6NUQ1 792 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 VN1R2Q8NFZ6 395 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 RASSF8Q8NHQ8 419 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 CALML4Q96GE6 196 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 IGSF21Q96ID5 467 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 ZFP42Q96MM3 310 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 ZNF396Q96N95 335 aaPredicted RBP16.78■□□□□ 0.28
ERCC1-209ENST00000589214 NT5C3AQ9H0P0 336 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 FZD8Q9H461 694 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 NGRNQ9NPE2 291 aaKnown RBP16.78■□□□□ 0.28
ERCC1-209ENST00000589214 UBN1Q9NPG3 1134 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 FAM50BQ9Y247 325 aa16.78■□□□□ 0.28
ERCC1-209ENST00000589214 TCHHQ07283 1943 aa16.77■□□□□ 0.28
ERCC1-209ENST00000589214 NPHP3-ACAD11A0A0J9YXS1 232 aa16.77■□□□□ 0.28
ERCC1-209ENST00000589214 A0A1B0GUA9 196 aa16.77■□□□□ 0.28
ERCC1-209ENST00000589214 ARL5CA6NH57 179 aa16.77■□□□□ 0.28
ERCC1-209ENST00000589214 N4BP3O15049 544 aa16.77■□□□□ 0.28
ERCC1-209ENST00000589214 MBTPS2O43462 519 aa16.77■□□□□ 0.28
ERCC1-209ENST00000589214 HIP1RO75146 1068 aa16.77■□□□□ 0.28
ERCC1-209ENST00000589214 PLA2G4BP0C869 781 aa16.77■□□□□ 0.28
ERCC1-209ENST00000589214 PLCG1P19174 1290 aa16.77■□□□□ 0.28
ERCC1-209ENST00000589214 AKAP5P24588 427 aa16.77■□□□□ 0.28
ERCC1-209ENST00000589214 NASPP49321 788 aaPredicted RBP16.77■□□□□ 0.28
ERCC1-209ENST00000589214 SMAD4Q13485 552 aaKnown RBP16.77■□□□□ 0.28
ERCC1-209ENST00000589214 BECN1Q14457 450 aa16.77■□□□□ 0.28
ERCC1-209ENST00000589214 LLGL2Q6P1M3 1020 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms