RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 ZMYM2Q9UBW7 1377 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 SFI1A8K8P3 1242 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 GRM6O15303 877 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 INPPL1O15357 1258 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 FAM13AO94988 1023 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 ITGB1P05556 798 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 STAT6P42226 847 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 ZNF131P52739 623 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 PLCB3Q01970 1234 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 KRT17Q04695 432 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 DNM1Q05193 864 aaKnown RBP11.12□□□□□ -0.63
TPM4-207ENST00000588032 RNASELQ05823 741 aaKnown RBP11.12□□□□□ -0.63
TPM4-207ENST00000588032 RAD51AP2Q09MP3 1159 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 STRN3Q13033 797 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 GIT2Q14161 759 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 DHX8Q14562 1220 aaKnown RBP11.12□□□□□ -0.63
TPM4-207ENST00000588032 CCDC85BQ15834 202 aaPredicted RBP11.12□□□□□ -0.63
TPM4-207ENST00000588032 DCAF4L1Q3SXM0 396 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 TIGD5Q53EQ6 642 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 ATF7IP2Q5U623 682 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 PDE12Q6L8Q7 609 aaKnown RBP11.12□□□□□ -0.63
TPM4-207ENST00000588032 KCNT2Q6UVM3 1135 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 THNSL1Q8IYQ7 743 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 SPPL3Q8TCT6 385 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 PPM1EQ8WY54 764 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 LPPQ93052 612 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 FAM193BQ96PV7 902 aaPredicted RBP11.12□□□□□ -0.63
TPM4-207ENST00000588032 REEP2Q9BRK0 252 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 PYM1Q9BRP8 204 aaKnown RBP11.12□□□□□ -0.63
TPM4-207ENST00000588032 MRPL4Q9BYD3 311 aaKnown RBP11.12□□□□□ -0.63
TPM4-207ENST00000588032 CUEDC2Q9H467 287 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 PARVGQ9HBI0 331 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 TBC1D13Q9NVG8 400 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 SPG21Q9NZD8 308 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 LZTS1Q9Y250 596 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 TNFSF13BQ9Y275 285 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 ZDHHC9Q9Y397 364 aa11.12□□□□□ -0.63
TPM4-207ENST00000588032 RALGAPA2Q2PPJ7 1873 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 NPHP3-ACAD11A0A0J9YXS1 232 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 MEIS3P2A8K0S8 358 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 SLC16A4O15374 487 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 NCK2O43639 380 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 TRAK2O60296 914 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 TBCAO75347 108 aaKnown RBP11.11□□□□□ -0.63
TPM4-207ENST00000588032 FGF18O76093 207 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 NPTXRO95502 500 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 LIG1P18858 919 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 ME1P48163 572 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 KRT85P78386 507 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 NUCB2P80303 420 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 AMPD3Q01432 767 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 BMS1Q14692 1282 aaKnown RBP11.11□□□□□ -0.63
TPM4-207ENST00000588032 FOXD4L6Q3SYB3 417 aaPredicted RBP11.11□□□□□ -0.63
TPM4-207ENST00000588032 LONRF3Q496Y0 759 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 FOXD4L3Q6VB84 417 aaPredicted RBP11.11□□□□□ -0.63
TPM4-207ENST00000588032 MICALL1Q8N3F8 863 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 MYCT1Q8N699 235 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 IQUBQ8NA54 791 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 TMEM161BQ8NDZ6 487 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 LRRC15Q8TF66 581 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 PPP2R3CQ969Q6 453 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 ACO2Q99798 780 aaKnown RBP11.11□□□□□ -0.63
TPM4-207ENST00000588032 TMEM175Q9BSA9 504 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 KIFC3Q9BVG8 833 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 PDZD7Q9H5P4 517 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 NSUN3Q9H649 340 aaKnown RBP11.11□□□□□ -0.63
TPM4-207ENST00000588032 ALG13Q9NP73 1137 aaKnown RBP11.11□□□□□ -0.63
TPM4-207ENST00000588032 FAM13BQ9NYF5 915 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 SEL1LQ9UBV2 794 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 STK39Q9UEW8 545 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 PCDHA7Q9UN72 937 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 COG5Q9UP83 839 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 INPP5FQ9Y2H2 1132 aa11.11□□□□□ -0.63
TPM4-207ENST00000588032 ARL5CA6NH57 179 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 NR1I2O75469 434 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 ALDH2P05091 517 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 MAPTP10636 758 aaKnown RBP11.1□□□□□ -0.63
TPM4-207ENST00000588032 NCKAP1LP55160 1127 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 BCAR1P56945 870 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 SKIV2LQ15477 1246 aaKnown RBP11.1□□□□□ -0.63
TPM4-207ENST00000588032 AAK1Q2M2I8 961 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 AXDND1Q5T1B0 1012 aaPredicted RBP11.1□□□□□ -0.63
TPM4-207ENST00000588032 NT5DC1Q5TFE4 455 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 SHC4Q6S5L8 630 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 ZPBP2Q6X784 338 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 HAUS6Q7Z4H7 955 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 CDR2LQ86X02 465 aaPredicted RBP11.1□□□□□ -0.63
TPM4-207ENST00000588032 SLC39A11Q8N1S5 342 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 POF1BQ8WVV4 589 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 ATXN2LQ8WWM7 1075 aaKnown RBP11.1□□□□□ -0.63
TPM4-207ENST00000588032 MRPS27Q92552 414 aaKnown RBP11.1□□□□□ -0.63
TPM4-207ENST00000588032 DDX12PQ92771 950 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 SPATA32Q96LK8 384 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 GAD1Q99259 594 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 PANK2Q9BZ23 570 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 SCAND2PQ9GZW5 306 aaPredicted RBP11.1□□□□□ -0.63
TPM4-207ENST00000588032 NXF3Q9H4D5 531 aaKnown RBP11.1□□□□□ -0.63
TPM4-207ENST00000588032 ZHX3Q9H4I2 956 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 NRDE2Q9H7Z3 1164 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 MAGEF1Q9HAY2 307 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms