RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	SLC6A15	Q9H2J7	730 aa		4.27	□□□□□ -1.73
MSI2-215	ENST00000582453	C12orf65	Q9H3J6	166 aa	Known RBP	4.27	□□□□□ -1.73
MSI2-215	ENST00000582453	NELFA	Q9H3P2	528 aa		4.27	□□□□□ -1.73
MSI2-215	ENST00000582453	MS4A5	Q9H3V2	200 aa		4.27	□□□□□ -1.73
MSI2-215	ENST00000582453	CD248	Q9HCU0	757 aa		4.27	□□□□□ -1.73
MSI2-215	ENST00000582453	DNAI1	Q9UI46	699 aa		4.27	□□□□□ -1.73
MSI2-215	ENST00000582453	ZFR2	Q9UPR6	939 aa	Known RBP	4.27	□□□□□ -1.73
MSI2-215	ENST00000582453	PPP2R3B	Q9Y5P8	575 aa		4.27	□□□□□ -1.73
MSI2-215	ENST00000582453	SLC30A1	Q9Y6M5	507 aa		4.27	□□□□□ -1.73
MSI2-215	ENST00000582453	NUMBL	Q9Y6R0	609 aa		4.27	□□□□□ -1.73
MSI2-215	ENST00000582453	RNF17	Q9BXT8	1623 aa	Known RBP	4.27	□□□□□ -1.73
MSI2-215	ENST00000582453	ARHGAP31	Q2M1Z3	1444 aa		4.27	□□□□□ -1.73
MSI2-215	ENST00000582453	VWDE	Q8N2E2	1590 aa		4.27	□□□□□ -1.73
MSI2-215	ENST00000582453	DEPDC5	O75140	1603 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	DAPK3	O43293	454 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	FOXS1	O43638	330 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	RAD17	O75943	681 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	FSBP	O95073	299 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	SELENOP	P49908	381 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	ANAPC15	P60006	121 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	ADAM17	P78536	824 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	NFKB2	Q00653	900 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	FAP	Q12884	760 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	TCIRG1	Q13488	830 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	STAT4	Q14765	748 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	GAGE13	Q4V321	117 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	HS1BP3	Q53T59	392 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	CLEC14A	Q86T13	490 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	CLRN3	Q8NCR9	226 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	SHCBP1	Q8NEM2	672 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	PPP1R14C	Q8TAE6	165 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453		Q8TCH9	128 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	DVL3	Q92997	716 aa	Predicted RBP	4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	ACAP3	Q96P50	834 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	PLA2G12B	Q9BX93	195 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	C14orf93	Q9H972	538 aa	Known RBP	4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	TCAF1	Q9Y4C2	921 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	RBM8A	Q9Y5S9	174 aa	Known RBP	4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	NPAT	Q14207	1427 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	KANK1	Q14678	1352 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	ADAMTSL3	P82987	1691 aa		4.26	□□□□□ -1.73
MSI2-215	ENST00000582453	RPRD2	Q5VT52	1461 aa	Known RBP	4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	MROH1	Q8NDA8	1641 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453		A0A0A6YYK5	440 aa	Predicted RBP	4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	PRSS38	A1L453	326 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	LCHN	A4D1U4	455 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	UNC13B	O14795	1591 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	KIF3B	O15066	747 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	NRP2	O60462	931 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	SEC24D	O94855	1032 aa	Predicted RBP	4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	ZNF20	P17024	532 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	COMT	P21964	271 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	BPIFB4	P59827	614 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	ATP2C1	P98194	919 aa	Predicted RBP	4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	RNF219	Q5W0B1	726 aa	Predicted RBP	4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	IQSEC1	Q6DN90	963 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	POLN	Q7Z5Q5	900 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	UNC5B	Q8IZJ1	945 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	FUK	Q8N0W3	1084 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	PLA2G15	Q8NCC3	412 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	GAB3	Q8WWW8	586 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	WWC2-AS2	Q96NR7	200 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	OR14A2	Q96R54	314 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	CDK5RAP1	Q96SZ6	601 aa	Known RBP	4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	SOX7	Q9BT81	388 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	FAM126A	Q9BYI3	521 aa	Predicted RBP	4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	KRTAP3-1	Q9BYR8	98 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	ANO3	Q9BYT9	981 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	DEF6	Q9H4E7	631 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	RRP7BP	Q9NSQ0	103 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	TYW1	Q9NV66	732 aa	Known RBP	4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	ST6GALNAC2	Q9UJ37	374 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	TMPRSS11E	Q9UL52	423 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	ABCC3	O15438	1527 aa		4.25	□□□□□ -1.73
MSI2-215	ENST00000582453	PZP	P20742	1482 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	PTPRM	P28827	1452 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	SETD5	Q9C0A6	1442 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	GPR39	O43194	453 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	MTSS1	O43312	755 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	JUN	P05412	331 aa	Known RBP	4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	VSIG10L2	P0DP72	767 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	GAA	P10253	952 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	HNRNPL	P14866	589 aa	Known RBP eCLIP	4.24	□□□□□ -1.73	4e-9	■□□□□ 11.3
MSI2-215	ENST00000582453	XPA	P23025	273 aa	Predicted RBP	4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	NRG3	P56975	720 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	TMPRSS15	P98073	1019 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	PPARA	Q07869	468 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	RIN1	Q13671	783 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	PDCD1	Q15116	288 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	FSCN1	Q16658	493 aa	Known RBP	4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	PLEKHG6	Q3KR16	790 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	CCDC62	Q6P9F0	684 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	SPATS2	Q86XZ4	545 aa	Known RBP	4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	GPR135	Q8IZ08	494 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	ANKRD53	Q8N9V6	530 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	OR14C36	Q8NHC7	312 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	WDR66	Q8TBY9	1149 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms