RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 SERPING1P05155 500 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 FECHP22830 423 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 MARK3P27448 753 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 ADCYAP1R1P41586 468 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 NAMPTP43490 491 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 CASP4P49662 377 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 ATN1P54259 1190 aaPredicted RBP10.1□□□□□ -0.79
SS18-220ENST00000582092 MYL7Q01449 175 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 KLHL30Q0D2K2 578 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 KCNMA1Q12791 1236 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 KIF5AQ12840 1032 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 MXD4Q14582 209 aaPredicted RBP10.1□□□□□ -0.79
SS18-220ENST00000582092 MTF1Q14872 753 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 MEA1Q16626 185 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 HABP4Q5JVS0 413 aaKnown RBP10.1□□□□□ -0.79
SS18-220ENST00000582092 CHRDL2Q6WN34 429 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 SLC39A5Q6ZMH5 540 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 ZBTB8OSQ8IWT0 167 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 C12orf56Q8IXR9 622 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 TMEM161BQ8NDZ6 487 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 MYRIPQ8NFW9 859 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 MORC4Q8TE76 937 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 SYN2Q92777 582 aaPredicted RBP10.1□□□□□ -0.79
SS18-220ENST00000582092 TMEM143Q96AN5 459 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 GLT1D1Q96MS3 346 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 FIZ1Q96SL8 496 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 CHP1Q99653 195 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 GPR20Q99678 358 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 NTPCRQ9BSD7 190 aaKnown RBP10.1□□□□□ -0.79
SS18-220ENST00000582092 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.1□□□□□ -0.79
SS18-220ENST00000582092 STRA6Q9BX79 667 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 HAUS4Q9H6D7 363 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 PLCB1Q9NQ66 1216 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 STARD7Q9NQZ5 370 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 DMAC2Q9NW81 257 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 GCNT4Q9P109 453 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 MYO6Q9UM54 1294 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 PLAGL2Q9UPG8 496 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 PHF24Q9UPV7 400 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 ATP11BQ9Y2G3 1177 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 Q9Y3F1 56 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 MROH7Q68CQ1 1323 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 IGKV6D-21A0A0A0MT36 114 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 EIF3CLB5ME19 914 aaKnown RBP10.09□□□□□ -0.79
SS18-220ENST00000582092 NKRFO15226 690 aaKnown RBP eCLIP10.09□□□□□ -0.79
SS18-220ENST00000582092 MAFO75444 373 aaPredicted RBP10.09□□□□□ -0.79
SS18-220ENST00000582092 CABYRO75952 493 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 URI1O94763 535 aaPredicted RBP10.09□□□□□ -0.79
SS18-220ENST00000582092 CLSTN1O94985 981 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 STBD1O95210 358 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 LDHAP00338 332 aaKnown RBP10.09□□□□□ -0.79
SS18-220ENST00000582092 TMOD1P28289 359 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 CST5P28325 142 aaPredicted RBP10.09□□□□□ -0.79
SS18-220ENST00000582092 EIF4A3P38919 411 aaKnown RBP10.09□□□□□ -0.79
SS18-220ENST00000582092 FMO5P49326 533 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 EFNA5P52803 228 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 NAP1L1P55209 391 aaKnown RBP10.09□□□□□ -0.79
SS18-220ENST00000582092 GJA9P57773 515 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 ARID5AQ03989 594 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 BFSP1Q12934 665 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 ENOX2Q16206 610 aaKnown RBP10.09□□□□□ -0.79
SS18-220ENST00000582092 LRRC26Q2I0M4 334 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 ZNF484Q5JVG2 852 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 GNASQ5JWF2 1037 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 ZNF569Q5MCW4 686 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 CCDC122Q5T0U0 273 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 C1orf53Q5VUE5 145 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 MAP4K3Q8IVH8 894 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 CCDC155Q8N6L0 562 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 METTL13Q8N6R0 699 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 ACRBPQ8NEB7 543 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 MNS1Q8NEH6 495 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 ATP8B4Q8TF62 1192 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 JAKMIP2Q96AA8 810 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 FGD4Q96M96 766 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 FNBP1Q96RU3 617 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 EIF3CQ99613 913 aaKnown RBP10.09□□□□□ -0.79
SS18-220ENST00000582092 SEZ6LQ9BYH1 1024 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 TTYH3Q9C0H2 523 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 C2orf40Q9H1Z8 148 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 DHX33Q9H6R0 707 aaKnown RBP10.09□□□□□ -0.79
SS18-220ENST00000582092 ERAP1Q9NZ08 941 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 MYO1AQ9UBC5 1043 aa10.09□□□□□ -0.79
SS18-220ENST00000582092 ZNF215Q9UL58 517 aaPredicted RBP10.09□□□□□ -0.79
SS18-220ENST00000582092 ZMYND8Q9ULU4 1186 aaPredicted RBP10.09□□□□□ -0.79
SS18-220ENST00000582092 COLQQ9Y215 455 aaPredicted RBP10.09□□□□□ -0.79
SS18-220ENST00000582092 BRCA2P51587 3418 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 CTAGE9A4FU28 777 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 GOLGA8IPA6NC78 632 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 ZNF233A6NK53 670 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 GOLGA8JA6NMD2 632 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 DCDC2CA8MYV0 355 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 RNF225M0QZC1 329 aaPredicted RBP10.08□□□□□ -0.8
SS18-220ENST00000582092 RIOK3O14730 519 aaKnown RBP10.08□□□□□ -0.8
SS18-220ENST00000582092 P4HA2O15460 535 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 ASAP2O43150 1006 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 ADAMTS4O75173 837 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 LGR5O75473 907 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 FERP16591 822 aa10.08□□□□□ -0.8
SS18-220ENST00000582092 SLC9A1P19634 815 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms