RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CAPN14A8MX76 684 aa6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 OPHN1O60890 802 aa6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 ABLIM3O94929 683 aa6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 MRPS9P82933 396 aaKnown RBP6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 CDK17Q00537 523 aa6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 EIF4HQ15056 248 aaKnown RBP6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 KCNK18Q7Z418 384 aa6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 NOL10Q9BSC4 688 aaKnown RBP6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 RHOBTB2Q9BYZ6 727 aa6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 PCED1AQ9H1Q7 454 aa6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 NELFAQ9H3P2 528 aa6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 TLR9Q9NR96 1032 aa6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 PLA2G3Q9NZ20 509 aa6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 KCMF1Q9P0J7 381 aa6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 PRSS50Q9UI38 385 aa6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 ING1Q9UK53 422 aaPredicted RBP6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 NOB1Q9ULX3 412 aaKnown RBP6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 SLC30A1Q9Y6M5 507 aa6.19□□□□□ -1.42
SMCHD1-205ENST00000581383 MAFGO15525 162 aa6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 MTHFD2P13995 350 aa6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 MTNR1BP49286 362 aa6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 ANTXR2P58335 489 aa6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 CCT2P78371 535 aaKnown RBP6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 KRT85P78386 507 aa6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 PPARAQ07869 468 aa6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 NFYCQ13952 458 aa6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 TBR1Q16650 682 aa6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 CPA6Q8N4T0 437 aa6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 ZNF808Q8N4W9 903 aaPredicted RBP6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 PPM1NQ8N819 430 aa6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 SHCBP1Q8NEM2 672 aa6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 GAB3Q8WWW8 586 aa6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 TEKT5Q96M29 485 aa6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 ANKRD6Q9Y2G4 727 aa6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 PCDHB6Q9Y5E3 794 aa6.18□□□□□ -1.42
SMCHD1-205ENST00000581383 A0A0A6YYJ9 748 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 A0A1W2PRX2 142 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 CYP27B1O15528 508 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 PF4V1P10720 104 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 AGXTP21549 392 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 MUM1Q2TAK8 710 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 CRB2Q5IJ48 1285 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 MIIPQ5JXC2 388 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 SLC41A1Q8IVJ1 513 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 TPH2Q8IWU9 490 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 THEMISQ8N1K5 641 aaPredicted RBP6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 CDYL2Q8N8U2 506 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 OR14C36Q8NHC7 312 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 TSPEARQ8WU66 669 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 RSAD2Q8WXG1 361 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 AUTS2Q8WXX7 1259 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 GCDHQ92947 438 aaPredicted RBP6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 PITHD1Q9GZP4 211 aaPredicted RBP6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 ZNF277Q9NRM2 450 aaPredicted RBP6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 GIT1Q9Y2X7 761 aa6.17□□□□□ -1.42
SMCHD1-205ENST00000581383 SLC26A4O43511 780 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 IL33O95760 270 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 C5AR1P21730 350 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 ACRV1P26436 265 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 DGCR2P98153 550 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 FOXL1Q12952 345 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 ADAM15Q13444 863 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 SPIDRQ14159 915 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 DGKDQ16760 1214 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 HSP90AB2PQ58FF8 381 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 NOL8Q76FK4 1167 aaKnown RBP6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 BMP8AQ7Z5Y6 402 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 CMTR2Q8IYT2 770 aaKnown RBP6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 OR5AN1Q8NGI8 311 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 NEU4Q8WWR8 484 aaPredicted RBP6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 HSPBAP1Q96EW2 488 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 ZNF503Q96F45 646 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 DYDC2Q96IM9 177 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 HIST1H2AHQ96KK5 128 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 CAMKK2Q96RR4 588 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 HIST1H2AJQ99878 128 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 IFT122Q9HBG6 1241 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 MSL2Q9HCI7 577 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 TCF7L1Q9HCS4 588 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 SAE1Q9UBE0 346 aaPredicted RBP6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 EVLQ9UI08 416 aaPredicted RBP6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 SYNPO2Q9UMS6 1093 aa6.16□□□□□ -1.42
SMCHD1-205ENST00000581383 NDUFS2O75306 463 aa6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 RFPL1O75677 317 aa6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 ADH4P08319 380 aa6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 SLC5A3P53794 718 aa6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 TMEM240Q5SV17 173 aa6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 MBNL2Q5VZF2 373 aaKnown RBP6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 TMEM200BQ69YZ2 307 aa6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 GAREM2Q75VX8 874 aa6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 ADGRE4PQ86SQ3 457 aa6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 C14orf80Q86SX3 495 aa6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 GSPT2Q8IYD1 628 aaKnown RBP6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 MYO1HQ8N1T3 1032 aa6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 SSH1Q8WYL5 1049 aa6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 ACE2Q9BYF1 805 aaPredicted RBP6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 AURKAIP1Q9NWT8 199 aaPredicted RBP6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 CDY2AQ9Y6F7 541 aa6.15□□□□□ -1.42
SMCHD1-205ENST00000581383 WDR33Q9C0J8 1336 aaKnown RBP6.15□□□□□ -1.43
SMCHD1-205ENST00000581383 A0A0A6YYK5 440 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms