RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 CSRNP2Q9H175 543 aa12.53□□□□□ -0.4
SMARCE1-214ENST00000578112 LIMD1Q9UGP4 676 aa12.53□□□□□ -0.4
SMARCE1-214ENST00000578112 PIEZO1Q92508 2521 aa12.53□□□□□ -0.4
SMARCE1-214ENST00000578112 CLUHO75153 1309 aa12.53□□□□□ -0.4
SMARCE1-214ENST00000578112 NRP1O14786 923 aa12.52□□□□□ -0.4
SMARCE1-214ENST00000578112 GLUD1P00367 558 aa12.52□□□□□ -0.4
SMARCE1-214ENST00000578112 HOXA11P31270 313 aaPredicted RBP12.52□□□□□ -0.4
SMARCE1-214ENST00000578112 YWHABP31946 246 aaKnown RBP12.52□□□□□ -0.4
SMARCE1-214ENST00000578112 MAGEA9P43362 315 aa12.52□□□□□ -0.4
SMARCE1-214ENST00000578112 KIAA0319Q5VV43 1072 aa12.52□□□□□ -0.4
SMARCE1-214ENST00000578112 PRPF31Q8WWY3 499 aaKnown RBP12.52□□□□□ -0.4
SMARCE1-214ENST00000578112 LPPQ93052 612 aa12.52□□□□□ -0.4
SMARCE1-214ENST00000578112 CHST7Q9NS84 486 aa12.52□□□□□ -0.4
SMARCE1-214ENST00000578112 INPP5FQ9Y2H2 1132 aa12.52□□□□□ -0.4
SMARCE1-214ENST00000578112 MTCL1Q9Y4B5 1905 aaKnown RBP12.52□□□□□ -0.41
SMARCE1-214ENST00000578112 SPDYE4A6NLX3 237 aa12.52□□□□□ -0.41
SMARCE1-214ENST00000578112 DGAT1O75907 488 aa12.52□□□□□ -0.41
SMARCE1-214ENST00000578112 DDHD2O94830 711 aa12.52□□□□□ -0.41
SMARCE1-214ENST00000578112 DTWD2Q8NBA8 298 aa12.52□□□□□ -0.41
SMARCE1-214ENST00000578112 PRIMPOLQ96LW4 560 aa12.52□□□□□ -0.41
SMARCE1-214ENST00000578112 MARCH5Q9NX47 278 aa12.52□□□□□ -0.41
SMARCE1-214ENST00000578112 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMARCE1-214ENST00000578112 DNAJB4Q9UDY4 337 aa12.52□□□□□ -0.41
SMARCE1-214ENST00000578112 PDGFBP01127 241 aaPredicted RBP12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 SRFP11831 508 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 CPA1P15085 419 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 HOXA9P31269 272 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 CCT2P78371 535 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 GRIK3Q13003 919 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 RSPO2Q6UXX9 243 aaPredicted RBP12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 PPP4R3CPQ6ZMV5 832 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 TRMT1LQ7Z2T5 733 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 ZNF280BQ86YH2 543 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 LXNQ9BS40 222 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 BRMS1Q9HCU9 246 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 MAN1C1Q9NR34 630 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 SLC2A4RGQ9NR83 387 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 C2orf16Q68DN1 1984 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 TDRD15B5MCY1 1934 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 H0Y858 1186 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 EML1O00423 815 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 TSPAN1O60635 241 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 HNRNPA1P09651 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 NPR3P17342 541 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 INF2Q27J81 1249 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 C12orf76Q8N812 135 aaPredicted RBP12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 SMG8Q8ND04 991 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 KCNK12Q9HB15 430 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 IPPQ9Y573 584 aa12.51□□□□□ -0.41
SMARCE1-214ENST00000578112 SLC37A4O43826 429 aa12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 IRX6P78412 446 aaPredicted RBP12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 ELAVL2Q12926 359 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 ORC2Q13416 577 aaPredicted RBP12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 ANKRD1Q15327 319 aa12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 FAM187BQ17R55 369 aa12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 USP41Q3LFD5 358 aa12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 PLA2G4FQ68DD2 849 aa12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 TMC5Q6UXY8 1006 aa12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 ZNF668Q96K58 619 aaPredicted RBP12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 FAM86C1Q9NVL1 165 aa12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 FBXL21Q9UKT6 434 aa12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 ARL2P36404 184 aa12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 ZC3H14Q6PJT7 736 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 RNF149Q8NC42 400 aa12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 AUTS2Q8WXX7 1259 aa12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 HAS1Q92839 578 aa12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 NCOA5Q9HCD5 579 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-214ENST00000578112 ANHXE9PGG2 379 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 MARCH6O60337 910 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 PFKFB2O60825 505 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 ASGR2P07307 311 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 MUTP22033 750 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 SPIRE1Q08AE8 756 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 XKR9Q5GH70 373 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 ERICH6BQ5W0A0 696 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 ASCL5Q7RTU5 278 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 SHDQ96IW2 340 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 OSBPL6Q9BZF3 934 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 GBP3Q9H0R5 595 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 C2orf40Q9H1Z8 148 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 ARL5CA6NH57 179 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 TEX28O15482 410 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 CSDE1O75534 798 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 SRGAP2CP0DJJ0 459 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 ANAPC15P60006 121 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 SLC27A1Q6PCB7 646 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 LILRA6Q6PI73 481 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 KSR1Q8IVT5 923 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 PRKD2Q9BZL6 878 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 SLKQ9H2G2 1235 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 PDRG1Q9NUG6 133 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 PRMT7Q9NVM4 692 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 PHLPP2Q6ZVD8 1323 aa12.49□□□□□ -0.41
SMARCE1-214ENST00000578112 CCDC195A0A1B0GUA6 201 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 TMEM150BA6NC51 233 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 MEIS3P2A8K0S8 358 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 CCNT1O60563 726 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 OR1G1P47890 313 aa12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 RBM25P49756 843 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-214ENST00000578112 NPEPPSP55786 919 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms