RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 SYCE2Q6PIF2 218 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 TAS1R1Q7RTX1 841 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 KCNK18Q7Z418 384 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 MRPL43Q8N983 215 aaKnown RBP13.18□□□□□ -0.3
LITAF-219ENST00000576334 ERMNQ8TAM6 284 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 SNX29Q8TEQ0 813 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 TMEM169Q96HH4 297 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 LRFN3Q9BTN0 628 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 MMTAG2Q9BU76 263 aaKnown RBP13.18□□□□□ -0.3
LITAF-219ENST00000576334 ZBP1Q9H171 429 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 BHMT2Q9H2M3 363 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.18□□□□□ -0.3
LITAF-219ENST00000576334 HCFC2Q9Y5Z7 792 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 WDFY4Q6ZS81 3184 aa13.17□□□□□ -0.3
LITAF-219ENST00000576334 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.17□□□□□ -0.3
LITAF-219ENST00000576334 NRP1O14786 923 aa13.17□□□□□ -0.3
LITAF-219ENST00000576334 CLASP2O75122 1294 aaKnown RBP13.17□□□□□ -0.3
LITAF-219ENST00000576334 WEE2P0C1S8 567 aa13.17□□□□□ -0.3
LITAF-219ENST00000576334 CYP11B2P19099 503 aa13.17□□□□□ -0.3
LITAF-219ENST00000576334 SP100P23497 879 aaPredicted RBP13.17□□□□□ -0.3
LITAF-219ENST00000576334 POU5F1BQ06416 359 aa13.17□□□□□ -0.3
LITAF-219ENST00000576334 ORC2Q13416 577 aaPredicted RBP13.17□□□□□ -0.3
LITAF-219ENST00000576334 SMC1AQ14683 1233 aaKnown RBP13.17□□□□□ -0.3
LITAF-219ENST00000576334 PDE12Q6L8Q7 609 aaKnown RBP13.17□□□□□ -0.3
LITAF-219ENST00000576334 ANKRD54Q6NXT1 300 aa13.17□□□□□ -0.3
LITAF-219ENST00000576334 C12orf76Q8N812 135 aaPredicted RBP13.17□□□□□ -0.3
LITAF-219ENST00000576334 IGSF22Q8N9C0 903 aa13.17□□□□□ -0.3
LITAF-219ENST00000576334 GSTCDQ8NEC7 633 aa13.17□□□□□ -0.3
LITAF-219ENST00000576334 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
LITAF-219ENST00000576334 PLIN2Q99541 437 aa13.17□□□□□ -0.3
LITAF-219ENST00000576334 NFKBIZQ9BYH8 718 aa13.17□□□□□ -0.3
LITAF-219ENST00000576334 S1PR5Q9H228 398 aa13.17□□□□□ -0.3
LITAF-219ENST00000576334 NGRNQ9NPE2 291 aaKnown RBP13.17□□□□□ -0.3
LITAF-219ENST00000576334 MARCH5Q9NX47 278 aa13.17□□□□□ -0.3
LITAF-219ENST00000576334 PRG3Q9Y2Y8 225 aaPredicted RBP13.17□□□□□ -0.3
LITAF-219ENST00000576334 A0A1B0GUA9 196 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 MYBP10242 640 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 EPCAMP16422 314 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 AXLP30530 894 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 PDIA5Q14554 519 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 ZRSR1Q15695 479 aaKnown RBP13.16□□□□□ -0.3
LITAF-219ENST00000576334 EEF1DP3Q658K8 133 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 CDCA2Q69YH5 1023 aaPredicted RBP13.16□□□□□ -0.3
LITAF-219ENST00000576334 DDX53Q86TM3 631 aaKnown RBP13.16□□□□□ -0.3
LITAF-219ENST00000576334 MCPH1Q8NEM0 835 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 B3GALT6Q96L58 329 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 PAAF1Q9BRP4 392 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 RUSC1Q9BVN2 902 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 CCDC113Q9H0I3 377 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 FZD8Q9H461 694 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 PDZD7Q9H5P4 517 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 UPF2Q9HAU5 1272 aaKnown RBP13.16□□□□□ -0.3
LITAF-219ENST00000576334 MUTYHQ9UIF7 546 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 FAM50BQ9Y247 325 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 FAN1Q9Y2M0 1017 aa13.16□□□□□ -0.3
LITAF-219ENST00000576334 CNTNAP2Q9UHC6 1331 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 H3BQV1 296 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 C2CD2LO14523 706 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 CTSAP10619 480 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 OR1G1P47890 313 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 RAD51AP2Q09MP3 1159 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 PTPN14Q15678 1187 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 HAUS3Q68CZ6 603 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 SLC27A1Q6PCB7 646 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 TMEM184AQ6ZMB5 413 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 RNF135Q8IUD6 432 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 COLGALT2Q8IYK4 626 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 DAW1Q8N136 415 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 SUSD6Q92537 303 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 RPGRIP1Q96KN7 1286 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 PNMA5Q96PV4 448 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 FAM193BQ96PV7 902 aaPredicted RBP13.15□□□□□ -0.3
LITAF-219ENST00000576334 CDCA3Q99618 268 aaPredicted RBP13.15□□□□□ -0.3
LITAF-219ENST00000576334 C1QTNF1Q9BXJ1 281 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 TRIM6Q9C030 488 aaPredicted RBP13.15□□□□□ -0.3
LITAF-219ENST00000576334 PRKAG3Q9UGI9 489 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 PARP2Q9UGN5 583 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 SMC3Q9UQE7 1217 aa13.15□□□□□ -0.3
LITAF-219ENST00000576334 VWA3AA6NCI4 1184 aa13.14□□□□□ -0.31
LITAF-219ENST00000576334 SFI1A8K8P3 1242 aa13.14□□□□□ -0.31
LITAF-219ENST00000576334 ALDH2P05091 517 aa13.14□□□□□ -0.31
LITAF-219ENST00000576334 PRKCBP05771 671 aa13.14□□□□□ -0.31
LITAF-219ENST00000576334 IGFBP6P24592 240 aaPredicted RBP13.14□□□□□ -0.31
LITAF-219ENST00000576334 ATP2C1P98194 919 aaPredicted RBP13.14□□□□□ -0.31
LITAF-219ENST00000576334 GRIN1Q05586 938 aa13.14□□□□□ -0.31
LITAF-219ENST00000576334 DSC1Q08554 894 aa13.14□□□□□ -0.31
LITAF-219ENST00000576334 NCBP1Q09161 790 aaKnown RBP13.14□□□□□ -0.31
LITAF-219ENST00000576334 TMEM31Q5JXX7 168 aa13.14□□□□□ -0.31
LITAF-219ENST00000576334 NT5DC1Q5TFE4 455 aa13.14□□□□□ -0.31
LITAF-219ENST00000576334 DTHD1Q6ZMT9 781 aa13.14□□□□□ -0.31
LITAF-219ENST00000576334 PPP4R3CPQ6ZMV5 832 aa13.14□□□□□ -0.31
LITAF-219ENST00000576334 ZBTB8OSQ8IWT0 167 aa13.14□□□□□ -0.31
LITAF-219ENST00000576334 CNNM3Q8NE01 707 aa13.14□□□□□ -0.31
LITAF-219ENST00000576334 LRRC15Q8TF66 581 aa13.14□□□□□ -0.31
LITAF-219ENST00000576334 CCDC51Q96ER9 411 aa13.14□□□□□ -0.31
LITAF-219ENST00000576334 SNTG2Q9NY99 539 aa13.14□□□□□ -0.31
LITAF-219ENST00000576334 TRIP11Q15643 1979 aa13.13□□□□□ -0.31
LITAF-219ENST00000576334 PLXNA3P51805 1871 aa13.13□□□□□ -0.31
LITAF-219ENST00000576334 NPHP3-ACAD11A0A0J9YXS1 232 aa13.13□□□□□ -0.31
LITAF-219ENST00000576334 LOC730098B7Z3J9 87 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms