RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 NOTUMQ6P988 496 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 SYCE2Q6PIF2 218 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 KCNK18Q7Z418 384 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 MRPL43Q8N983 215 aaKnown RBP12.55□□□□□ -0.4
RPAIN-214ENST00000574003 ERMNQ8TAM6 284 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 URGCPQ8TCY9 931 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 SNX29Q8TEQ0 813 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 LRFN3Q9BTN0 628 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 ZBP1Q9H171 429 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 BHMT2Q9H2M3 363 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 NGRNQ9NPE2 291 aaKnown RBP12.55□□□□□ -0.4
RPAIN-214ENST00000574003 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.55□□□□□ -0.4
RPAIN-214ENST00000574003 DDX19AQ9NUU7 478 aaKnown RBP12.55□□□□□ -0.4
RPAIN-214ENST00000574003 MARCH5Q9NX47 278 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 FAM50BQ9Y247 325 aa12.55□□□□□ -0.4
RPAIN-214ENST00000574003 PRG3Q9Y2Y8 225 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-214ENST00000574003 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-214ENST00000574003 ARL5CA6NH57 179 aa12.54□□□□□ -0.4
RPAIN-214ENST00000574003 SMC1AQ14683 1233 aaKnown RBP12.54□□□□□ -0.4
RPAIN-214ENST00000574003 ZRSR1Q15695 479 aaKnown RBP12.54□□□□□ -0.4
RPAIN-214ENST00000574003 EEF1DP3Q658K8 133 aa12.54□□□□□ -0.4
RPAIN-214ENST00000574003 PDE12Q6L8Q7 609 aaKnown RBP12.54□□□□□ -0.4
RPAIN-214ENST00000574003 TAS1R1Q7RTX1 841 aa12.54□□□□□ -0.4
RPAIN-214ENST00000574003 DDX53Q86TM3 631 aaKnown RBP12.54□□□□□ -0.4
RPAIN-214ENST00000574003 C12orf76Q8N812 135 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-214ENST00000574003 MCPH1Q8NEM0 835 aa12.54□□□□□ -0.4
RPAIN-214ENST00000574003 FAM193BQ96PV7 902 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-214ENST00000574003 PLIN2Q99541 437 aa12.54□□□□□ -0.4
RPAIN-214ENST00000574003 MMTAG2Q9BU76 263 aaKnown RBP12.54□□□□□ -0.4
RPAIN-214ENST00000574003 S1PR5Q9H228 398 aa12.54□□□□□ -0.4
RPAIN-214ENST00000574003 UPF2Q9HAU5 1272 aaKnown RBP12.54□□□□□ -0.4
RPAIN-214ENST00000574003 MUTYHQ9UIF7 546 aa12.54□□□□□ -0.4
RPAIN-214ENST00000574003 HCFC2Q9Y5Z7 792 aa12.54□□□□□ -0.4
RPAIN-214ENST00000574003 TDRD15B5MCY1 1934 aaKnown RBP12.54□□□□□ -0.4
RPAIN-214ENST00000574003 H3BQV1 296 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 NRP1O14786 923 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 MYBP10242 640 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 CTSAP10619 480 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 EPCAMP16422 314 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 AXLP30530 894 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 POU5F1BQ06416 359 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 HAUS3Q68CZ6 603 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 CDCA2Q69YH5 1023 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-214ENST00000574003 COLGALT2Q8IYK4 626 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 IGSF22Q8N9C0 903 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 GSTCDQ8NEC7 633 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 RPGRIP1Q96KN7 1286 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 CDCA3Q99618 268 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-214ENST00000574003 RUSC1Q9BVN2 902 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 C1QTNF1Q9BXJ1 281 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 NFKBIZQ9BYH8 718 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 TRIM6Q9C030 488 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-214ENST00000574003 FZD8Q9H461 694 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 PDZD7Q9H5P4 517 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 PRKAG3Q9UGI9 489 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 PARP2Q9UGN5 583 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 SMC3Q9UQE7 1217 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 FAN1Q9Y2M0 1017 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 CNTNAP2Q9UHC6 1331 aa12.53□□□□□ -0.4
RPAIN-214ENST00000574003 TECTAO75443 2155 aa12.52□□□□□ -0.4
RPAIN-214ENST00000574003 A0A1B0GUA9 196 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 C2CD2LO14523 706 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 ALDH2P05091 517 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 PRKCBP05771 671 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 OR1G1P47890 313 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 PTPN14Q15678 1187 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 TMEM132AQ24JP5 1023 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 TMEM31Q5JXX7 168 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 TMEM184AQ6ZMB5 413 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 RNF135Q8IUD6 432 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 ZBTB8OSQ8IWT0 167 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 DEPTORQ8TB45 409 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 SUSD6Q92537 303 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 CCDC51Q96ER9 411 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 B3GALT6Q96L58 329 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 PNMA5Q96PV4 448 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 CCDC113Q9H0I3 377 aa12.52□□□□□ -0.41
RPAIN-214ENST00000574003 TRIP11Q15643 1979 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 MYO10Q9HD67 2058 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 VWA3AA6NCI4 1184 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 SFI1A8K8P3 1242 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 DCXO43602 365 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 IGFBP6P24592 240 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-214ENST00000574003 ATP2C1P98194 919 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-214ENST00000574003 DSC1Q08554 894 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 NCBP1Q09161 790 aaKnown RBP12.51□□□□□ -0.41
RPAIN-214ENST00000574003 RAD51AP2Q09MP3 1159 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 PRPF4BQ13523 1007 aaKnown RBP12.51□□□□□ -0.41
RPAIN-214ENST00000574003 PDIA5Q14554 519 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 RARS2Q5T160 578 aaKnown RBP12.51□□□□□ -0.41
RPAIN-214ENST00000574003 NT5DC1Q5TFE4 455 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 LARP1BQ659C4 914 aaKnown RBP12.51□□□□□ -0.41
RPAIN-214ENST00000574003 SLC27A1Q6PCB7 646 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 DTHD1Q6ZMT9 781 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 PPP4R3CPQ6ZMV5 832 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 DAW1Q8N136 415 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 CNNM3Q8NE01 707 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 SLC22A17Q8WUG5 538 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 KLHL5Q96PQ7 755 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 PAAF1Q9BRP4 392 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms