RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 GDPD5Q8WTR4 605 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 KCNN1Q92952 543 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 MRPL38Q96DV4 380 aaKnown RBP15.35■□□□□ 0.05
RPAIN-211ENST00000572174 CPB2Q96IY4 423 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 SPATA32Q96LK8 384 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 ZNF558Q96NG5 402 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 CASD1Q96PB1 797 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 FAM193BQ96PV7 902 aaPredicted RBP15.35■□□□□ 0.05
RPAIN-211ENST00000572174 REEP2Q9BRK0 252 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 GIT1Q9Y2X7 761 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 IPPQ9Y573 584 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 CDH23Q9H251 3354 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 GAP43P17677 238 aa15.34■□□□□ 0.05
RPAIN-211ENST00000572174 LIG1P18858 919 aa15.34■□□□□ 0.05
RPAIN-211ENST00000572174 ALDH7A1P49419 539 aaKnown RBP15.34■□□□□ 0.05
RPAIN-211ENST00000572174 ZNF131P52739 623 aa15.34■□□□□ 0.05
RPAIN-211ENST00000572174 RAD51AP2Q09MP3 1159 aa15.34■□□□□ 0.05
RPAIN-211ENST00000572174 FOXD4L6Q3SYB3 417 aaPredicted RBP15.34■□□□□ 0.05
RPAIN-211ENST00000572174 CLLU1OSQ5K130 101 aa15.34■□□□□ 0.05
RPAIN-211ENST00000572174 ATF7IP2Q5U623 682 aa15.34■□□□□ 0.05
RPAIN-211ENST00000572174 FOXD4L3Q6VB84 417 aaPredicted RBP15.34■□□□□ 0.05
RPAIN-211ENST00000572174 THNSL1Q8IYQ7 743 aa15.34■□□□□ 0.05
RPAIN-211ENST00000572174 MYCT1Q8N699 235 aa15.34■□□□□ 0.05
RPAIN-211ENST00000572174 RPS6KC1Q96S38 1066 aa15.34■□□□□ 0.05
RPAIN-211ENST00000572174 TNMDQ9H2S6 317 aa15.34■□□□□ 0.05
RPAIN-211ENST00000572174 TYW1Q9NV66 732 aaKnown RBP15.34■□□□□ 0.05
RPAIN-211ENST00000572174 PUF60Q9UHX1 559 aaKnown RBP15.34■□□□□ 0.05
RPAIN-211ENST00000572174 RCOR1Q9UKL0 485 aa15.34■□□□□ 0.05
RPAIN-211ENST00000572174 SLC16A4O15374 487 aa15.33■□□□□ 0.04
RPAIN-211ENST00000572174 B4GALT5O43286 388 aa15.33■□□□□ 0.04
RPAIN-211ENST00000572174 NR1I2O75469 434 aa15.33■□□□□ 0.04
RPAIN-211ENST00000572174 NPTXRO95502 500 aa15.33■□□□□ 0.04
RPAIN-211ENST00000572174 GATMP50440 423 aa15.33■□□□□ 0.04
RPAIN-211ENST00000572174 KRT17Q04695 432 aa15.33■□□□□ 0.04
RPAIN-211ENST00000572174 UBXN11Q5T124 520 aa15.33■□□□□ 0.04
RPAIN-211ENST00000572174 PDE12Q6L8Q7 609 aaKnown RBP15.33■□□□□ 0.04
RPAIN-211ENST00000572174 FAM178BQ8IXR5 827 aa15.33■□□□□ 0.04
RPAIN-211ENST00000572174 COLGALT1Q8NBJ5 622 aa15.33■□□□□ 0.04
RPAIN-211ENST00000572174 RNF19AQ9NV58 838 aa15.33■□□□□ 0.04
RPAIN-211ENST00000572174 LZTS1Q9Y250 596 aa15.33■□□□□ 0.04
RPAIN-211ENST00000572174 TNFSF13BQ9Y275 285 aa15.33■□□□□ 0.04
RPAIN-211ENST00000572174 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.33■□□□□ 0.04
RPAIN-211ENST00000572174 MTCH2Q9Y6C9 303 aa15.33■□□□□ 0.04
RPAIN-211ENST00000572174 EPOPA6NHQ4 379 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 K7ENM7 598 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 INPPL1O15357 1258 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 NCK2O43639 380 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 TRAK2O60296 914 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 LPXNO60711 386 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 LINC00271P0C7V0 271 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 MAPTP10636 758 aaKnown RBP15.32■□□□□ 0.04
RPAIN-211ENST00000572174 NCKAP1LP55160 1127 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 ALCAMQ13740 583 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 GIT2Q14161 759 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 ADGRE1Q14246 886 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 KYAT1Q16773 422 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 ARSHQ5FYA8 562 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 ZPBP2Q6X784 338 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 AGMOQ6ZNB7 445 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 STXBP4Q6ZWJ1 553 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 USP49Q70CQ1 688 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 TMEM161BQ8NDZ6 487 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 HVCN1Q96D96 273 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 BICD1Q96G01 975 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 CCDC34Q96HJ3 373 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 TMEM175Q9BSA9 504 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 KIFC3Q9BVG8 833 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 EIF2AQ9BY44 585 aaKnown RBP15.32■□□□□ 0.04
RPAIN-211ENST00000572174 ZHX3Q9H4I2 956 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 PDZD7Q9H5P4 517 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 TOPORSQ9NS56 1045 aaPredicted RBP15.32■□□□□ 0.04
RPAIN-211ENST00000572174 TBC1D13Q9NVG8 400 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 USP25Q9UHP3 1055 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 CIZ1Q9ULV3 898 aaPredicted RBP15.32■□□□□ 0.04
RPAIN-211ENST00000572174 PCDHA7Q9UN72 937 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 INPP5FQ9Y2H2 1132 aa15.32■□□□□ 0.04
RPAIN-211ENST00000572174 MYO7AQ13402 2215 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 ZC3H11AO75152 810 aaKnown RBP eCLIP15.31■□□□□ 0.04
RPAIN-211ENST00000572174 OFD1O75665 1012 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 TOM1L1O75674 476 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 YARSP54577 528 aaKnown RBP15.31■□□□□ 0.04
RPAIN-211ENST00000572174 PLCB3Q01970 1234 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 GRIK3Q13003 919 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 ZNF568Q3ZCX4 644 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 AXDND1Q5T1B0 1012 aaPredicted RBP15.31■□□□□ 0.04
RPAIN-211ENST00000572174 RESP18Q5W5W9 173 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 ADALQ6DHV7 355 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 KCNT2Q6UVM3 1135 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 MPZL3Q6UWV2 235 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 HAUS6Q7Z4H7 955 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 CCDC65Q8IXS2 484 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 MICALL1Q8N3F8 863 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 PDILTQ8N807 584 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 KLHL23Q8NBE8 558 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 SMG8Q8ND04 991 aaKnown RBP15.31■□□□□ 0.04
RPAIN-211ENST00000572174 LEO1Q8WVC0 666 aaPredicted RBP15.31■□□□□ 0.04
RPAIN-211ENST00000572174 DDX12PQ92771 950 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 LPPQ93052 612 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 TMEM169Q96HH4 297 aa15.31■□□□□ 0.04
RPAIN-211ENST00000572174 CCDC94Q9BW85 323 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms