RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SMG7Q92540 1137 aaKnown RBP16.63■□□□□ 0.25
USB1-214ENST00000568848 RPS6KC1Q96S38 1066 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 RNF26Q9BY78 433 aaPredicted RBP16.63■□□□□ 0.25
USB1-214ENST00000568848 RGL1Q9NZL6 768 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 PCDHA4Q9UN74 947 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 IPPQ9Y573 584 aa16.63■□□□□ 0.25
USB1-214ENST00000568848 FAM205CA6NFA0 338 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 M0R2N6 131 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 ALDH2P05091 517 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 IFNAR1P17181 557 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 RFX1P22670 979 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 RAB27AP51159 221 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 PSMC5P62195 406 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 STK3Q13188 491 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 KRT32Q14532 448 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 KIAA0319Q5VV43 1072 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 HASPINQ8TF76 798 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 PGBD4Q96DM1 585 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 CEP170P1Q96L14 293 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 GPR62Q9BZJ7 368 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 CXCL16Q9H2A7 254 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
USB1-214ENST00000568848 NXF3Q9H4D5 531 aaKnown RBP16.62■□□□□ 0.25
USB1-214ENST00000568848 WDR6Q9NNW5 1121 aaKnown RBP16.62■□□□□ 0.25
USB1-214ENST00000568848 KLK14Q9P0G3 267 aa16.62■□□□□ 0.25
USB1-214ENST00000568848 DDX25Q9UHL0 483 aaKnown RBP16.62■□□□□ 0.25
USB1-214ENST00000568848 TDRD15B5MCY1 1934 aaKnown RBP16.62■□□□□ 0.25
USB1-214ENST00000568848 ARL5CA6NH57 179 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 B4GALT5O43286 388 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 TSPAN1O60635 241 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 CDC45O75419 566 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 GLUD1P00367 558 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 SKIP12755 728 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 ITGA4P13612 1032 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 AKAP5P24588 427 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 GLUD2P49448 558 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 CYP4A11Q02928 519 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 TOB2Q14106 344 aaPredicted RBP16.61■□□□□ 0.25
USB1-214ENST00000568848 CTTNQ14247 550 aaKnown RBP16.61■□□□□ 0.25
USB1-214ENST00000568848 PRSS55Q6UWB4 352 aaPredicted RBP16.61■□□□□ 0.25
USB1-214ENST00000568848 BLIDQ8IZY5 108 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 RNF149Q8NC42 400 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 KCNB2Q92953 911 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 MBOAT7Q96N66 472 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 PAAF1Q9BRP4 392 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 TMEM175Q9BSA9 504 aa16.61■□□□□ 0.25
USB1-214ENST00000568848 MYH15Q9Y2K3 1946 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 CYP3A7-CYP3A51PA0A087WV96 503 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 TGM5O43548 720 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 EFEMP2O95967 443 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 NCLP19338 710 aaKnown RBP16.6■□□□□ 0.25
USB1-214ENST00000568848 CYP3A7P24462 503 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 IGFBP6P24592 240 aaPredicted RBP16.6■□□□□ 0.25
USB1-214ENST00000568848 HSPA4P34932 840 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 EMC2Q15006 297 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 EARS2Q5JPH6 523 aaKnown RBP16.6■□□□□ 0.25
USB1-214ENST00000568848 C15orf39Q6ZRI6 1047 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 RNF168Q8IYW5 571 aaPredicted RBP16.6■□□□□ 0.25
USB1-214ENST00000568848 ZNF710Q8N1W2 664 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 RDM1Q8NG50 284 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 OXER1Q8TDS5 423 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 ASAP3Q8TDY4 903 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 DYDC2Q96IM9 177 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 HINFPQ9BQA5 517 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 RTP3Q9BQQ7 232 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 INO80BQ9C086 356 aaPredicted RBP16.6■□□□□ 0.25
USB1-214ENST00000568848 DHX33Q9H6R0 707 aaKnown RBP16.6■□□□□ 0.25
USB1-214ENST00000568848 XPNPEP1Q9NQW7 623 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 IGSF9Q9P2J2 1179 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 NUMBLQ9Y6R0 609 aa16.6■□□□□ 0.25
USB1-214ENST00000568848 ADH1AP07327 375 aa16.59■□□□□ 0.25
USB1-214ENST00000568848 HMGB1P09429 215 aaKnown RBP16.59■□□□□ 0.25
USB1-214ENST00000568848 QARSP47897 775 aaKnown RBP16.59■□□□□ 0.25
USB1-214ENST00000568848 FOXK2Q01167 660 aa16.59■□□□□ 0.25
USB1-214ENST00000568848 NCAPH2Q6IBW4 605 aa16.59■□□□□ 0.25
USB1-214ENST00000568848 CMASQ8NFW8 434 aaPredicted RBP16.59■□□□□ 0.25
USB1-214ENST00000568848 PSPC1Q8WXF1 523 aaKnown RBP16.59■□□□□ 0.25
USB1-214ENST00000568848 HAS1Q92839 578 aa16.59■□□□□ 0.25
USB1-214ENST00000568848 LXNQ9BS40 222 aa16.59■□□□□ 0.25
USB1-214ENST00000568848 NT5C3AQ9H0P0 336 aa16.59■□□□□ 0.25
USB1-214ENST00000568848 PIDD1Q9HB75 910 aa16.59■□□□□ 0.25
USB1-214ENST00000568848 ARHGEF3Q9NR81 526 aa16.59■□□□□ 0.25
USB1-214ENST00000568848 DLGAP2Q9P1A6 1054 aa16.59■□□□□ 0.25
USB1-214ENST00000568848 EPS15L1Q9UBC2 864 aa16.59■□□□□ 0.25
USB1-214ENST00000568848 USP20Q9Y2K6 914 aa16.59■□□□□ 0.25
USB1-214ENST00000568848 MTF2Q9Y483 593 aaPredicted RBP16.59■□□□□ 0.25
USB1-214ENST00000568848 MTCL1Q9Y4B5 1905 aaKnown RBP16.58■□□□□ 0.25
USB1-214ENST00000568848 ADAM12O43184 909 aa16.58■□□□□ 0.24
USB1-214ENST00000568848 GAS2O43903 313 aaKnown RBP16.58■□□□□ 0.24
USB1-214ENST00000568848 LMNAP02545 664 aaKnown RBP16.58■□□□□ 0.24
USB1-214ENST00000568848 SP9P0CG40 484 aa16.58■□□□□ 0.24
USB1-214ENST00000568848 SRFP11831 508 aa16.58■□□□□ 0.24
USB1-214ENST00000568848 DSC1Q08554 894 aa16.58■□□□□ 0.24
USB1-214ENST00000568848 SSRP1Q08945 709 aaKnown RBP16.58■□□□□ 0.24
USB1-214ENST00000568848 HTR4Q13639 388 aa16.58■□□□□ 0.24
USB1-214ENST00000568848 XKR9Q5GH70 373 aa16.58■□□□□ 0.24
USB1-214ENST00000568848 RTP2Q5QGT7 225 aa16.58■□□□□ 0.24
USB1-214ENST00000568848 PARM1Q6UWI2 310 aa16.58■□□□□ 0.24
USB1-214ENST00000568848 ERMP1Q7Z2K6 904 aa16.58■□□□□ 0.24
USB1-214ENST00000568848 FERMT3Q86UX7 667 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms