RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 POP1Q99575 1024 aaKnown RBP15.98■□□□□ 0.15
CMTM3-215ENST00000568477 TMEM175Q9BSA9 504 aa15.98■□□□□ 0.15
CMTM3-215ENST00000568477 C2orf40Q9H1Z8 148 aa15.98■□□□□ 0.15
CMTM3-215ENST00000568477 BHMT2Q9H2M3 363 aa15.98■□□□□ 0.15
CMTM3-215ENST00000568477 EPHX3Q9H6B9 360 aa15.98■□□□□ 0.15
CMTM3-215ENST00000568477 DDX19AQ9NUU7 478 aaKnown RBP15.98■□□□□ 0.15
CMTM3-215ENST00000568477 PRMT7Q9NVM4 692 aaPredicted RBP15.98■□□□□ 0.15
CMTM3-215ENST00000568477 KIAA1024Q9UPX6 916 aa15.98■□□□□ 0.15
CMTM3-215ENST00000568477 C2orf71A6NGG8 1288 aa15.97■□□□□ 0.15
CMTM3-215ENST00000568477 B4GALT3O60512 393 aa15.97■□□□□ 0.15
CMTM3-215ENST00000568477 POMCP01189 267 aa15.97■□□□□ 0.15
CMTM3-215ENST00000568477 NAMPTP43490 491 aa15.97■□□□□ 0.15
CMTM3-215ENST00000568477 AFF1P51825 1210 aaKnown RBP15.97■□□□□ 0.15
CMTM3-215ENST00000568477 PPP2R5AQ15172 486 aa15.97■□□□□ 0.15
CMTM3-215ENST00000568477 SLC27A1Q6PCB7 646 aa15.97■□□□□ 0.15
CMTM3-215ENST00000568477 DDX53Q86TM3 631 aaKnown RBP15.97■□□□□ 0.15
CMTM3-215ENST00000568477 DEPTORQ8TB45 409 aa15.97■□□□□ 0.15
CMTM3-215ENST00000568477 BCL7CQ8WUZ0 217 aaPredicted RBP15.97■□□□□ 0.15
CMTM3-215ENST00000568477 BSNDQ8WZ55 320 aa15.97■□□□□ 0.15
CMTM3-215ENST00000568477 KHSRPQ92945 711 aaKnown RBP eCLIP15.97■□□□□ 0.15
CMTM3-215ENST00000568477 GAD1Q99259 594 aa15.97■□□□□ 0.15
CMTM3-215ENST00000568477 APOL6Q9BWW8 343 aa15.97■□□□□ 0.15
CMTM3-215ENST00000568477 ZBP1Q9H171 429 aa15.97■□□□□ 0.15
CMTM3-215ENST00000568477 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
CMTM3-215ENST00000568477 USP15Q9Y4E8 981 aaPredicted RBP15.97■□□□□ 0.15
CMTM3-215ENST00000568477 HES2Q9Y543 173 aa15.97■□□□□ 0.15
CMTM3-215ENST00000568477 A0A1B0GUA9 196 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 ARL5CA6NH57 179 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 C19orf67A6NJJ6 358 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 PP2D1A8MPX8 630 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 INPPL1O15357 1258 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 DDHD2O94830 711 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 NPTXRO95502 500 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 CXCL14O95715 111 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 ALDH2P05091 517 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 MLH1P40692 756 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 ATP2C1P98194 919 aaPredicted RBP15.96■□□□□ 0.15
CMTM3-215ENST00000568477 KCNC3Q14003 757 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 MAPK6Q16659 721 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 FAM187BQ17R55 369 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 TMEM132AQ24JP5 1023 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 LLGL2Q6P1M3 1020 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 TMEM184AQ6ZMB5 413 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 CDR2LQ86X02 465 aaPredicted RBP15.96■□□□□ 0.15
CMTM3-215ENST00000568477 TMEM87AQ8NBN3 555 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 KIFAP3Q92845 792 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 IFT74Q96LB3 600 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 FZD8Q9H461 694 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 NXF3Q9H4D5 531 aaKnown RBP15.96■□□□□ 0.15
CMTM3-215ENST00000568477 STK39Q9UEW8 545 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 DNM3Q9UQ16 869 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 FAN1Q9Y2M0 1017 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 GIT1Q9Y2X7 761 aa15.96■□□□□ 0.15
CMTM3-215ENST00000568477 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.95■□□□□ 0.14
CMTM3-215ENST00000568477 PI4K2BG5E9Z4 385 aa15.95■□□□□ 0.14
CMTM3-215ENST00000568477 PRKCBP05771 671 aa15.95■□□□□ 0.14
CMTM3-215ENST00000568477 CTSAP10619 480 aa15.95■□□□□ 0.14
CMTM3-215ENST00000568477 SCNN1GP51170 649 aa15.95■□□□□ 0.14
CMTM3-215ENST00000568477 GIT2Q14161 759 aa15.95■□□□□ 0.14
CMTM3-215ENST00000568477 IL17AQ16552 155 aa15.95■□□□□ 0.14
CMTM3-215ENST00000568477 LARP1BQ659C4 914 aaKnown RBP15.95■□□□□ 0.14
CMTM3-215ENST00000568477 ANKRD54Q6NXT1 300 aa15.95■□□□□ 0.14
CMTM3-215ENST00000568477 AUTS2Q8WXX7 1259 aa15.95■□□□□ 0.14
CMTM3-215ENST00000568477 CASP10Q92851 521 aa15.95■□□□□ 0.14
CMTM3-215ENST00000568477 ZFP42Q96MM3 310 aa15.95■□□□□ 0.14
CMTM3-215ENST00000568477 IRAK3Q9Y616 596 aa15.95■□□□□ 0.14
CMTM3-215ENST00000568477 ZMYM2Q9UBW7 1377 aa15.95■□□□□ 0.14
CMTM3-215ENST00000568477 NRP1O14786 923 aa15.94■□□□□ 0.14
CMTM3-215ENST00000568477 N4BP3O15049 544 aa15.94■□□□□ 0.14
CMTM3-215ENST00000568477 CLASP2O75122 1294 aaKnown RBP15.94■□□□□ 0.14
CMTM3-215ENST00000568477 ALADP13716 330 aa15.94■□□□□ 0.14
CMTM3-215ENST00000568477 HOXB8P17481 243 aaPredicted RBP15.94■□□□□ 0.14
CMTM3-215ENST00000568477 LIG1P18858 919 aa15.94■□□□□ 0.14
CMTM3-215ENST00000568477 CDC25AP30304 524 aa15.94■□□□□ 0.14
CMTM3-215ENST00000568477 EFNA5P52803 228 aa15.94■□□□□ 0.14
CMTM3-215ENST00000568477 PRPF4BQ13523 1007 aaKnown RBP15.94■□□□□ 0.14
CMTM3-215ENST00000568477 VN1R3Q9BXE9 311 aa15.94■□□□□ 0.14
CMTM3-215ENST00000568477 CCDC113Q9H0I3 377 aa15.94■□□□□ 0.14
CMTM3-215ENST00000568477 PRG3Q9Y2Y8 225 aaPredicted RBP15.94■□□□□ 0.14
CMTM3-215ENST00000568477 HCFC2Q9Y5Z7 792 aa15.94■□□□□ 0.14
CMTM3-215ENST00000568477 E9PMD0 336 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 ACKR2O00590 384 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 NR1I2O75469 434 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 AKAP5P24588 427 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 OR1G1P47890 313 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 DSC1Q08554 894 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 PTPN14Q15678 1187 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 ZRSR1Q15695 479 aaKnown RBP15.93■□□□□ 0.14
CMTM3-215ENST00000568477 TPRNQ4KMQ1 711 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 TMEM31Q5JXX7 168 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 ARL6IP4Q66PJ3 421 aaKnown RBP15.93■□□□□ 0.14
CMTM3-215ENST00000568477 SYCE2Q6PIF2 218 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 COLGALT2Q8IYK4 626 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 SUSD6Q92537 303 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 RPS6KC1Q96S38 1066 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 ADPGKQ9BRR6 497 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 MMTAG2Q9BU76 263 aaKnown RBP15.93■□□□□ 0.14
CMTM3-215ENST00000568477 KIFC3Q9BVG8 833 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 PDZD7Q9H5P4 517 aa15.93■□□□□ 0.14
CMTM3-215ENST00000568477 POLD4Q9HCU8 107 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms