RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 CATSPER4Q7RTX7 472 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.85□□□□□ -0.19
SF3B3-206ENST00000565990 DEFB128Q7Z7B8 93 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 CRIPAKQ8N1N5 446 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 TRIML1Q8N9V2 468 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 KIAA0895Q8NCT3 520 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 FAM200AQ8TCP9 573 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 TMEM174Q8WUU8 243 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 ACO2Q99798 780 aaKnown RBP13.85□□□□□ -0.19
SF3B3-206ENST00000565990 LBHD1Q9BQE6 289 aaPredicted RBP13.85□□□□□ -0.19
SF3B3-206ENST00000565990 RGS18Q9NS28 235 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 EXOC1Q9NV70 894 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 STYXL1Q9Y6J8 313 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 CNTNAP2Q9UHC6 1331 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 TTC3P53804 2025 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 ABHD14A-ACY1A0A1B0GW23 586 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 RBAK-RBAKDNI3L0D1 243 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 DYNC1I1O14576 645 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 ABLIM1O14639 778 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 B4GALT5O43286 388 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 MGEA5O60502 916 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 ZNF623O75123 536 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 ERLIN2O94905 339 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 FGBP02675 491 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 PROZP22891 400 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 BMP8BP34820 402 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 NCBP1Q09161 790 aaKnown RBP13.84□□□□□ -0.19
SF3B3-206ENST00000565990 STRN3Q13033 797 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 PRPF4BQ13523 1007 aaKnown RBP13.84□□□□□ -0.19
SF3B3-206ENST00000565990 IKBKEQ14164 716 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 TMEM240Q5SV17 173 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 STXBP4Q6ZWJ1 553 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 ZNF365Q70YC5 407 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 MAP4K3Q8IVH8 894 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 CCDC51Q96ER9 411 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 ACCSQ96QU6 501 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 GDF15Q99988 308 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 MRPL4Q9BYD3 311 aaKnown RBP13.84□□□□□ -0.19
SF3B3-206ENST00000565990 TSPYL2Q9H2G4 693 aaPredicted RBP13.84□□□□□ -0.19
SF3B3-206ENST00000565990 TMEM206Q9H813 350 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 PCDH10Q9P2E7 1040 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 TNFSF13BQ9Y275 285 aa13.84□□□□□ -0.19
SF3B3-206ENST00000565990 A0A0U1RQF3 1178 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.83□□□□□ -0.2
SF3B3-206ENST00000565990 C9IYK1 514 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 TGFB1I1O43294 461 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 TOM1L1O75674 476 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 BAIAP3O94812 1187 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 PRPF6O94906 941 aaKnown RBP13.83□□□□□ -0.2
SF3B3-206ENST00000565990 GCNT3O95395 438 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 ACRP10323 421 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 MAGEA10P43363 369 aaPredicted RBP13.83□□□□□ -0.2
SF3B3-206ENST00000565990 SNRPFP62306 86 aaKnown RBP13.83□□□□□ -0.2
SF3B3-206ENST00000565990 UBXN11Q5T124 520 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 ATF7IP2Q5U623 682 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 RASIP1Q5U651 963 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 MRPL10Q7Z7H8 261 aaKnown RBP13.83□□□□□ -0.2
SF3B3-206ENST00000565990 GUF1Q8N442 669 aaKnown RBP13.83□□□□□ -0.2
SF3B3-206ENST00000565990 RNF214Q8ND24 703 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 LINC01599Q8WXQ3 324 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 HERVK_113Q902F9 699 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 EXOC7Q9UPT5 735 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 GDAQ9Y2T3 454 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 UBE4BO95155 1302 aa13.83□□□□□ -0.2
SF3B3-206ENST00000565990 PDE4DIPQ5VU43 2346 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 PPP1R3GB7ZBB8 358 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 EFCAB14O75071 495 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 ADCY5O95622 1261 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 ACTN1P12814 892 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 ZSCAN20P17040 1043 aaPredicted RBP13.82□□□□□ -0.2
SF3B3-206ENST00000565990 PRCPP42785 496 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 KNOP1Q1ED39 458 aaKnown RBP13.82□□□□□ -0.2
SF3B3-206ENST00000565990 SLC39A4Q6P5W5 647 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 NOTUMQ6P988 496 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 SLC27A1Q6PCB7 646 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 SLC24A5Q71RS6 500 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 MYOCDQ8IZQ8 938 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 ADSSL1Q8N142 457 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 ADAM2Q99965 735 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.82□□□□□ -0.27e-8■■□□□ 11.8
SF3B3-206ENST00000565990 TARS2Q9BW92 718 aaKnown RBP13.82□□□□□ -0.2
SF3B3-206ENST00000565990 KCTD10Q9H3F6 313 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 PDZD7Q9H5P4 517 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 C1orf112Q9NSG2 853 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 SPTLC3Q9NUV7 552 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 USP20Q9Y2K6 914 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 CEP290O15078 2479 aa13.82□□□□□ -0.2
SF3B3-206ENST00000565990 A0A0B4J269 797 aa13.81□□□□□ -0.2
SF3B3-206ENST00000565990 ANKRD63C9JTQ0 380 aa13.81□□□□□ -0.2
SF3B3-206ENST00000565990 N4BP3O15049 544 aa13.81□□□□□ -0.2
SF3B3-206ENST00000565990 KIF20AO95235 890 aa13.81□□□□□ -0.2
SF3B3-206ENST00000565990 SKIP12755 728 aa13.81□□□□□ -0.2
SF3B3-206ENST00000565990 ADSSP30520 456 aa13.81□□□□□ -0.2
SF3B3-206ENST00000565990 PPP1R2P41236 205 aa13.81□□□□□ -0.2
SF3B3-206ENST00000565990 HSP90AA2PQ14568 343 aaPredicted RBP13.81□□□□□ -0.2
SF3B3-206ENST00000565990 SLFN12LQ6IEE8 588 aa13.81□□□□□ -0.2
SF3B3-206ENST00000565990 CENPPQ6IPU0 288 aa13.81□□□□□ -0.2
SF3B3-206ENST00000565990 PSRC1Q6PGN9 363 aaPredicted RBP13.81□□□□□ -0.2
SF3B3-206ENST00000565990 ZNF598Q86UK7 904 aaKnown RBP13.81□□□□□ -0.2
SF3B3-206ENST00000565990 DHTKD1Q96HY7 919 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms