RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CATSPER3Q86XQ3 398 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 GPR65Q8IYL9 337 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 SMG8Q8ND04 991 aaKnown RBP13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 PIGOQ8TEQ8 1089 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 TRIM6Q9C030 488 aaPredicted RBP13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 GBP3Q9H0R5 595 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 TMEM60Q9H2L4 133 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 MRPL17Q9NRX2 175 aaKnown RBP13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 BMP2KQ9NSY1 1161 aaPredicted RBP13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 DNAJB4Q9UDY4 337 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 DPP7Q9UHL4 492 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 TMEM221A6NGB7 291 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 ARL5CA6NH57 179 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 M0R296 226 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 NRP1O14786 923 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 LILRB3O75022 631 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 POMCP01189 267 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 ARF4P18085 180 aaPredicted RBP13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 ATP2B1P20020 1258 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 ST3GAL1Q11201 340 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 PDIA5Q14554 519 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 PTPN14Q15678 1187 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 AMHR2Q16671 573 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 PTPN21Q16825 1174 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 FAM187BQ17R55 369 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 SLC27A1Q6PCB7 646 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 ELMSAN1Q6PJG2 1045 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 CYP26C1Q6V0L0 522 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 COLGALT2Q8IYK4 626 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 FAM184AQ8NB25 1140 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 ASAP3Q8TDY4 903 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 PBXIP1Q96AQ6 731 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 KLHL5Q96PQ7 755 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 COLEC11Q9BWP8 271 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 POLR3FQ9H1D9 316 aaPredicted RBP13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 C2orf40Q9H1Z8 148 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 PRMT7Q9NVM4 692 aaPredicted RBP13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 USTQ9Y2C2 406 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 PIEZO1Q92508 2521 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 TECTAO75443 2155 aa13.51□□□□□ -0.25
GTF3C1-204ENST00000564664 POTEMA6NI47 508 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 WNT7AO00755 349 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 SOD2P04179 222 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 CENPBP07199 599 aaPredicted RBP13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 OR52Z1P0C646 297 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 CYP11B2P19099 503 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 KLRC2P26717 231 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 DSC1Q08554 894 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 GNL2Q13823 731 aaKnown RBP13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 ZNF174Q15697 407 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 HAUS3Q68CZ6 603 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 KIAA1841Q6NSI8 718 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 CABP7Q86V35 215 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 NOSTRINQ8IVI9 506 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 CCDC83Q8IWF9 413 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 ZBTB8OSQ8IWT0 167 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 UBALD2Q8IYN6 164 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 ZDHHC14Q8IZN3 488 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 BCL7CQ8WUZ0 217 aaPredicted RBP13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 CPB2Q96IY4 423 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 GAD1Q99259 594 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 VN1R3Q9BXE9 311 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 EIF2AQ9BY44 585 aaKnown RBP13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 RHOBTB2Q9BYZ6 727 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 RAB34Q9BZG1 259 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 FZD8Q9H461 694 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 NOL7Q9UMY1 257 aaKnown RBP13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 TRIOO75962 3097 aa13.5□□□□□ -0.25
GTF3C1-204ENST00000564664 USO1O60763 962 aaKnown RBP13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 MED24O75448 989 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 EFEMP2O95967 443 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 URODP06132 367 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 U2AF2P26368 475 aaKnown RBP eCLIP13.49□□□□□ -0.252e-6■■■□□ 14.8
GTF3C1-204ENST00000564664 OR1G1P47890 313 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 FXR2P51116 673 aaKnown RBP eCLIP13.49□□□□□ -0.253e-8■■■□□ 18
GTF3C1-204ENST00000564664 CLCN4P51793 760 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 AFF1P51825 1210 aaKnown RBP13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 GUCY1B3Q02153 619 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 PPP2R5AQ15172 486 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 TTC38Q5R3I4 469 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 CDCA2Q69YH5 1023 aaPredicted RBP13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 C15orf39Q6ZRI6 1047 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 CMASQ8NFW8 434 aaPredicted RBP13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 HDAC7Q8WUI4 952 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 AUTS2Q8WXX7 1259 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 FBXL18Q96ME1 805 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 RPS6KC1Q96S38 1066 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 HERC2P3Q9BVR0 1158 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 APOL5Q9BWW9 433 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 RNF39Q9H2S5 420 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 POMKQ9H5K3 350 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 SFXN1Q9H9B4 322 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 RXFP1Q9HBX9 757 aa13.49□□□□□ -0.25
GTF3C1-204ENST00000564664 ARHGEF35A5YM69 484 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 LRRIQ4A6NIV6 560 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 LAD1O00515 517 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 ACKR2O00590 384 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 B4GALT3O60512 393 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms