RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 NPTX2P47972 431 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 KCNQ1P51787 676 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 UBE3AQ05086 875 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 STK38Q15208 465 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 TMEM119Q4V9L6 283 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 PPP4R3CPQ6ZMV5 832 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 C1orf186Q6ZWK4 172 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 TMC7Q7Z402 723 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 MRPS27Q92552 414 aaKnown RBP14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 TMEM169Q96HH4 297 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 ZNF396Q96N95 335 aaPredicted RBP14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 USP28Q96RU2 1077 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 TIPINQ9BVW5 301 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 FZD8Q9H461 694 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 CCDC39Q9UFE4 941 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 USP20Q9Y2K6 914 aa14.3□□□□□ -0.12
CTDSPL2-209ENST00000560620 ARL5CA6NH57 179 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 ACKR2O00590 384 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 SLC26A4O43511 780 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 PDIA4P13667 645 aaKnown RBP14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 GUCY2CP25092 1073 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 NRIP1P48552 1158 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 AFF1P51825 1210 aaKnown RBP14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 SMTNP53814 917 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 HYAL1Q12794 435 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 CAMK1Q14012 370 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 BMS1Q14692 1282 aaKnown RBP14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 PTPAQ15257 358 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 FAM187BQ17R55 369 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 PLPP4Q5VZY2 271 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 GPBP1Q86WP2 473 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 ZNF280BQ86YH2 543 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 TMEM87AQ8NBN3 555 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 EPSTI1Q96J88 318 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 CLIC6Q96NY7 704 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 RPS6KC1Q96S38 1066 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 GAD1Q99259 594 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 TCF25Q9BQ70 676 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 COL25A1Q9BXS0 654 aaPredicted RBP14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 ZHX3Q9H4I2 956 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 NRDE2Q9H7Z3 1164 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 KCND2Q9NZV8 630 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 KLK14Q9P0G3 267 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 TFIP11Q9UBB9 837 aaKnown RBP14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 DNAJB4Q9UDY4 337 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 DAXXQ9UER7 740 aaPredicted RBP14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 FBXO2Q9UK22 296 aaPredicted RBP14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 RBM19Q9Y4C8 960 aaKnown RBP14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 PCDHGC5Q9Y5F6 944 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 SRPRBQ9Y5M8 271 aaKnown RBP14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 XIRP2A4UGR9 3374 aa14.29□□□□□ -0.12
CTDSPL2-209ENST00000560620 NPHP3-ACAD11A0A0J9YXS1 232 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 CARNS1A5YM72 827 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 TTLL13PA6NNM8 815 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 H3BQ06 376 aaPredicted RBP14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 SLC16A4O15374 487 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 NCK2O43639 380 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 GTF2F1P35269 517 aaKnown RBP eCLIP14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 OR1G1P47890 313 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 SLC12A3P55017 1021 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 ERVFC1P60507 584 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 PLCB3Q01970 1234 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 STRN3Q13033 797 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 MCM6Q14566 821 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 SLC39A14Q15043 492 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 ATF7IP2Q5U623 682 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 PHLPP2Q6ZVD8 1323 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 APBB1IPQ7Z5R6 666 aaPredicted RBP14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 ADGRD2Q7Z7M1 963 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 DAW1Q8N136 415 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 SLC39A11Q8N1S5 342 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 KRI1Q8N9T8 703 aaKnown RBP14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 PABPC5Q96DU9 382 aaKnown RBP14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 ZFP42Q96MM3 310 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 CCDC113Q9H0I3 377 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 PDZD7Q9H5P4 517 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 TLE6Q9H808 572 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 C17orf75Q9HAS0 396 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 LARSQ9P2J5 1176 aaKnown RBP14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 KCNG1Q9UIX4 513 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 LZTS1Q9Y250 596 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 FAN1Q9Y2M0 1017 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 GIT1Q9Y2X7 761 aa14.28□□□□□ -0.12
CTDSPL2-209ENST00000560620 MYO7AQ13402 2215 aa14.27□□□□□ -0.12
CTDSPL2-209ENST00000560620 MYH11P35749 1972 aa14.27□□□□□ -0.12
CTDSPL2-209ENST00000560620 ATG2AQ2TAZ0 1938 aa14.27□□□□□ -0.12
CTDSPL2-209ENST00000560620 PER2O15055 1255 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 NR1I2O75469 434 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 DDHD2O94830 711 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 FAM13AO94988 1023 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 ALDH2P05091 517 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 GALTP07902 379 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 ZSCAN22P10073 491 aaPredicted RBP14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 PLS3P13797 630 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 SLC11A1P49279 550 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 NDUFV1P49821 464 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 SCNN1GP51170 649 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 PDE12Q6L8Q7 609 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms