RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 TMEM87AQ8NBN3 555 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 SMG8Q8ND04 991 aaKnown RBP9.04□□□□□ -0.96
SNX1-207ENST00000559401 AK8Q96MA6 479 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 PNMA5Q96PV4 448 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 RPS6KC1Q96S38 1066 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 GAD1Q99259 594 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 ADPGKQ9BRR6 497 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 MMTAG2Q9BU76 263 aaKnown RBP9.04□□□□□ -0.96
SNX1-207ENST00000559401 RUSC1Q9BVN2 902 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 NRDE2Q9H7Z3 1164 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 KMT5AQ9NQR1 393 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 KLK14Q9P0G3 267 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 KANSL3Q9P2N6 904 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 DNAJB4Q9UDY4 337 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 LZTS1Q9Y250 596 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 USP20Q9Y2K6 914 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 CUL9Q8IWT3 2517 aa9.04□□□□□ -0.96
SNX1-207ENST00000559401 CARNS1A5YM72 827 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 K7ERI5 159 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 TNFRSF10AO00220 468 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 STX6O43752 255 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 TBX10O75333 385 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 KRT18P05783 430 aaKnown RBP9.03□□□□□ -0.96
SNX1-207ENST00000559401 PLA2G4BP0C869 781 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 SRGAP2BP0DMP2 458 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 IL9P15248 144 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 MARCKSP29966 332 aaPredicted RBP9.03□□□□□ -0.96
SNX1-207ENST00000559401 LONP1P36776 959 aaKnown RBP9.03□□□□□ -0.96
SNX1-207ENST00000559401 OR1G1P47890 313 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 SLC11A1P49279 550 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 SCNN1GP51170 649 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 AFF1P51825 1210 aaKnown RBP9.03□□□□□ -0.96
SNX1-207ENST00000559401 EFNA5P52803 228 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 CACNB1Q02641 598 aaPredicted RBP9.03□□□□□ -0.96
SNX1-207ENST00000559401 GRIN1Q05586 938 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 DMP1Q13316 513 aaPredicted RBP9.03□□□□□ -0.96
SNX1-207ENST00000559401 SMC1AQ14683 1233 aaKnown RBP9.03□□□□□ -0.96
SNX1-207ENST00000559401 FOXD4L5Q5VV16 416 aaPredicted RBP9.03□□□□□ -0.96
SNX1-207ENST00000559401 PDE12Q6L8Q7 609 aaKnown RBP9.03□□□□□ -0.96
SNX1-207ENST00000559401 RINT1Q6NUQ1 792 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 LLGL2Q6P1M3 1020 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 ZNF280BQ86YH2 543 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 EFHBQ8N7U6 833 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 SPRYD3Q8NCJ5 442 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.03□□□□□ -0.96
SNX1-207ENST00000559401 FOXD4L4Q8WXT5 416 aaPredicted RBP9.03□□□□□ -0.96
SNX1-207ENST00000559401 SNX21Q969T3 373 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 ZFP42Q96MM3 310 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 RNF39Q9H2S5 420 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 FZD8Q9H461 694 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 PDZD7Q9H5P4 517 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 NGRNQ9NPE2 291 aaKnown RBP9.03□□□□□ -0.96
SNX1-207ENST00000559401 MTMR6Q9Y217 621 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 FAM50BQ9Y247 325 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 FAN1Q9Y2M0 1017 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 PRG3Q9Y2Y8 225 aaPredicted RBP9.03□□□□□ -0.96
SNX1-207ENST00000559401 CLIC4Q9Y696 253 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 PHLPP2Q6ZVD8 1323 aa9.03□□□□□ -0.96
SNX1-207ENST00000559401 A0A1B0GUA9 196 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.02□□□□□ -0.97
SNX1-207ENST00000559401 FSD2A1L4K1 749 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 ARL5CA6NH57 179 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 TTLL13PA6NNM8 815 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 SFI1A8K8P3 1242 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 HIDE1A8MVS5 230 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 ACKR2O00590 384 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 SLC16A4O15374 487 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 B4GALT3O60512 393 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 NR1I2O75469 434 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 DDHD2O94830 711 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 GALTP07902 379 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 HARSP12081 509 aaKnown RBP9.02□□□□□ -0.97
SNX1-207ENST00000559401 PLCG1P19174 1290 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 SSTR3P32745 418 aaPredicted RBP9.02□□□□□ -0.97
SNX1-207ENST00000559401 TXLNAP40222 546 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 NPTX2P47972 431 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 DLX2Q07687 328 aaPredicted RBP9.02□□□□□ -0.97
SNX1-207ENST00000559401 ADAM15Q13444 863 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 KARSQ15046 597 aaKnown RBP9.02□□□□□ -0.97
SNX1-207ENST00000559401 STK38Q15208 465 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 FAM187BQ17R55 369 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 PUS10Q3MIT2 529 aaKnown RBP9.02□□□□□ -0.97
SNX1-207ENST00000559401 TMEM119Q4V9L6 283 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 HYIQ5T013 277 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 ATF7IP2Q5U623 682 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 EEF1DP3Q658K8 133 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 C1orf186Q6ZWK4 172 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 APBB1IPQ7Z5R6 666 aaPredicted RBP9.02□□□□□ -0.97
SNX1-207ENST00000559401 GPBP1Q86WP2 473 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 TMEM173Q86WV6 379 aaPredicted RBP9.02□□□□□ -0.97
SNX1-207ENST00000559401 VPS52Q8N1B4 723 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 SYT2Q8N9I0 419 aaPredicted RBP9.02□□□□□ -0.97
SNX1-207ENST00000559401 AUTS2Q8WXX7 1259 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 IGSF21Q96ID5 467 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 CDCA3Q99618 268 aaPredicted RBP9.02□□□□□ -0.97
SNX1-207ENST00000559401 TIPINQ9BVW5 301 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 CCDC113Q9H0I3 377 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 ZHX3Q9H4I2 956 aa9.02□□□□□ -0.97
SNX1-207ENST00000559401 ZSCAN16Q9H4T2 348 aaPredicted RBP9.02□□□□□ -0.97
SNX1-207ENST00000559401 CD207Q9UJ71 328 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms