RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 COL4A4P53420 1690 aaPredicted RBP9.87□□□□□ -0.83
SPG11-207ENST00000558138 MYO9BQ13459 2157 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 POLR2DO15514 142 aaKnown RBP9.87□□□□□ -0.83
SPG11-207ENST00000558138 TRAK2O60296 914 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 POMCP01189 267 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 RB1P06400 928 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 AKAP5P24588 427 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 HOXA11P31270 313 aaPredicted RBP9.87□□□□□ -0.83
SPG11-207ENST00000558138 MLH1P40692 756 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 ALDH7A1P49419 539 aaKnown RBP9.87□□□□□ -0.83
SPG11-207ENST00000558138 YARSP54577 528 aaKnown RBP9.87□□□□□ -0.83
SPG11-207ENST00000558138 MAPK7Q13164 816 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 GIT2Q14161 759 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 AMHR2Q16671 573 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 FAM187BQ17R55 369 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 CSPP1Q1MSJ5 1256 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 NOMO2Q5JPE7 1267 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 CLLU1OSQ5K130 101 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 ZBTB33Q86T24 672 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 COLGALT1Q8NBJ5 622 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 TMEM87AQ8NBN3 555 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 MICAL1Q8TDZ2 1067 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 LEO1Q8WVC0 666 aaPredicted RBP9.87□□□□□ -0.83
SPG11-207ENST00000558138 RSPH1Q8WYR4 309 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 DDX12PQ92771 950 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 CASD1Q96PB1 797 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 PYM1Q9BRP8 204 aaKnown RBP9.87□□□□□ -0.83
SPG11-207ENST00000558138 PLVAPQ9BX97 442 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 FZD8Q9H461 694 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 NXF3Q9H4D5 531 aaKnown RBP9.87□□□□□ -0.83
SPG11-207ENST00000558138 PDZD7Q9H5P4 517 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 TMEM134Q9H6X4 195 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 RC3H2Q9HBD1 1191 aaKnown RBP9.87□□□□□ -0.83
SPG11-207ENST00000558138 ALG13Q9NP73 1137 aaKnown RBP9.87□□□□□ -0.83
SPG11-207ENST00000558138 GDAQ9Y2T3 454 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 ZDHHC9Q9Y397 364 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 LAMA2P24043 3122 aaKnown RBP9.87□□□□□ -0.83
SPG11-207ENST00000558138 RALGAPA2Q2PPJ7 1873 aa9.87□□□□□ -0.83
SPG11-207ENST00000558138 A0A1B0GUA9 196 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 H3BNC9 293 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 LPXNO60711 386 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 ZNF623O75123 536 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 NR1I2O75469 434 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 ATF7P17544 494 aaPredicted RBP9.86□□□□□ -0.83
SPG11-207ENST00000558138 ABCD1P33897 745 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 PPM1AP35813 382 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 PBX3P40426 434 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 LIG4P49917 911 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 OSTNP61366 133 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 ASIC1P78348 528 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 KRT17Q04695 432 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 ADGRE1Q14246 886 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 BMS1Q14692 1282 aaKnown RBP9.86□□□□□ -0.83
SPG11-207ENST00000558138 FNDC1Q4ZHG4 1894 aaPredicted RBP9.86□□□□□ -0.83
SPG11-207ENST00000558138 TIGD5Q53EQ6 642 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 ARSHQ5FYA8 562 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 HERC4Q5GLZ8 1057 aaPredicted RBP9.86□□□□□ -0.83
SPG11-207ENST00000558138 UBXN11Q5T124 520 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 SHC4Q6S5L8 630 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 ZNF598Q86UK7 904 aaKnown RBP9.86□□□□□ -0.83
SPG11-207ENST00000558138 CCDC65Q8IXS2 484 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 DAW1Q8N136 415 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 KLHL23Q8NBE8 558 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 SLC17A8Q8NDX2 589 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 SPIRE2Q8WWL2 714 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 STAMQ92783 540 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 CLP1Q92989 425 aaKnown RBP9.86□□□□□ -0.83
SPG11-207ENST00000558138 PPP2R3CQ969Q6 453 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 CHAMP1Q96JM3 812 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 GAD1Q99259 594 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 CCDC94Q9BW85 323 aaPredicted RBP9.86□□□□□ -0.83
SPG11-207ENST00000558138 TARS2Q9BW92 718 aaKnown RBP9.86□□□□□ -0.83
SPG11-207ENST00000558138 TRAIPQ9BWF2 469 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 CCDC113Q9H0I3 377 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 CUEDC2Q9H467 287 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 MRPL44Q9H9J2 332 aaKnown RBP9.86□□□□□ -0.83
SPG11-207ENST00000558138 GDPD2Q9HCC8 539 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 SNTG2Q9NY99 539 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 KLK14Q9P0G3 267 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 TBC1D7Q9P0N9 293 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 KANSL3Q9P2N6 904 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 HCSTQ9UBK5 93 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 PUF60Q9UHX1 559 aaKnown RBP9.86□□□□□ -0.83
SPG11-207ENST00000558138 RCOR1Q9UKL0 485 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 KCNH3Q9ULD8 1083 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 COL4A6Q14031 1691 aa9.86□□□□□ -0.83
SPG11-207ENST00000558138 KIAA1671Q9BY89 1806 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 A0A087X0B3 334 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 MYMKA6NI61 221 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 MEIS3P2A8K0S8 358 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 NT5C1B-RDH14C9J2C7 533 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 HNRNPDLO14979 420 aaKnown RBP9.85□□□□□ -0.83
SPG11-207ENST00000558138 OFD1O75665 1012 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 GCNT3O95395 438 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 GAP43P17677 238 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 AFMP43652 599 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 OR1G1P47890 313 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 SCNN1GP51170 649 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 NAALADL2Q58DX5 795 aa9.85□□□□□ -0.83
SPG11-207ENST00000558138 RESP18Q5W5W9 173 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms