RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 FERMT2Q96AC1 680 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 BBC3Q96PG8 261 aaPredicted RBP3.85□□□□□ -1.79
FOXN3-216ENST00000557496 THG1LQ9NWX6 298 aaKnown RBP3.85□□□□□ -1.79
FOXN3-216ENST00000557496 ZNHIT2Q9UHR6 403 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 MSRAQ9UJ68 235 aa3.85□□□□□ -1.79
FOXN3-216ENST00000557496 LEFTY2O00292 366 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 NRP2O60462 931 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 NCR1O76036 304 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 IL12RB1P42701 662 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 PHC1P78364 1004 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 BEAN1Q3B7T3 259 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 XYLT1Q86Y38 959 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 PASD1Q8IV76 773 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 ARHGEF19Q8IW93 802 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 GAB3Q8WWW8 586 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 MRFAP1L1Q96HT8 127 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 DCLRE1CQ96SD1 692 aaKnown RBP3.84□□□□□ -1.79
FOXN3-216ENST00000557496 MTFR1LQ9H019 292 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 SERHL2Q9H4I8 314 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 SYNPO2LQ9H987 977 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 CYP4F11Q9HBI6 524 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 AKIP1Q9NQ31 210 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 IFT57Q9NWB7 429 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 TRPM5Q9NZQ8 1165 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 PTGFRNQ9P2B2 879 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 DKK2Q9UBU2 259 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 USP18Q9UMW8 372 aa3.84□□□□□ -1.79
FOXN3-216ENST00000557496 GAGE12BA1L429 117 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 PRSS38A1L453 326 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 LCHNA4D1U4 455 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 GAGE12HA6NDE8 117 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 RNASET2O00584 256 aaKnown RBP3.83□□□□□ -1.8
FOXN3-216ENST00000557496 ZSCAN20P17040 1043 aaPredicted RBP3.83□□□□□ -1.8
FOXN3-216ENST00000557496 TYRP1P17643 537 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 MGAT5Q09328 741 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 CSRP2Q16527 193 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 CCDC62Q6P9F0 684 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 DRICH1Q6PGQ1 229 aaPredicted RBP3.83□□□□□ -1.8
FOXN3-216ENST00000557496 LMBR1LQ6UX01 489 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 BTNL9Q6UXG8 535 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 LRRTM3Q86VH5 581 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 ADGRG3Q86Y34 549 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 SYT12Q8IV01 421 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 SMC1BQ8NDV3 1235 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 WDR11Q9BZH6 1224 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 SYBUQ9NX95 663 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 ANKFY1Q9P2R3 1169 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 TMPRSS11EQ9UL52 423 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 HDAC5Q9UQL6 1122 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 PPP2R3BQ9Y5P8 575 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 NUMBLQ9Y6R0 609 aa3.83□□□□□ -1.8
FOXN3-216ENST00000557496 PRR5-ARHGAP8B1AHC4 643 aa3.82□□□□□ -1.8
FOXN3-216ENST00000557496 DIRC3C9JPN6 131 aa3.82□□□□□ -1.8
FOXN3-216ENST00000557496 KIAA0355O15063 1070 aa3.82□□□□□ -1.8
FOXN3-216ENST00000557496 HSP90B1P14625 803 aaKnown RBP3.82□□□□□ -1.8
FOXN3-216ENST00000557496 XPAP23025 273 aaPredicted RBP3.82□□□□□ -1.8
FOXN3-216ENST00000557496 CLK3P49761 638 aaKnown RBP3.82□□□□□ -1.8
FOXN3-216ENST00000557496 NEK4P51957 841 aa3.82□□□□□ -1.8
FOXN3-216ENST00000557496 KPNA1P52294 538 aaPredicted RBP3.82□□□□□ -1.8
FOXN3-216ENST00000557496 NRG3P56975 720 aa3.82□□□□□ -1.8
FOXN3-216ENST00000557496 MRPS21P82921 87 aaKnown RBP3.82□□□□□ -1.8
FOXN3-216ENST00000557496 TERF2Q15554 542 aa3.82□□□□□ -1.8
FOXN3-216ENST00000557496 PLXDC1Q8IUK5 500 aa3.82□□□□□ -1.8
FOXN3-216ENST00000557496 LYSMD2Q8IV50 215 aa3.82□□□□□ -1.8
FOXN3-216ENST00000557496 SLC41A1Q8IVJ1 513 aa3.82□□□□□ -1.8
FOXN3-216ENST00000557496 GLB1L2Q8IW92 636 aa3.82□□□□□ -1.8
FOXN3-216ENST00000557496 ZNF610Q8N9Z0 462 aa3.82□□□□□ -1.8
FOXN3-216ENST00000557496 SREK1Q8WXA9 508 aaKnown RBP3.82□□□□□ -1.8
FOXN3-216ENST00000557496 MS4A5Q9H3V2 200 aa3.82□□□□□ -1.8
FOXN3-216ENST00000557496 PRDM13Q9H4Q3 707 aa3.82□□□□□ -1.8
FOXN3-216ENST00000557496 EVLQ9UI08 416 aaPredicted RBP3.82□□□□□ -1.8
FOXN3-216ENST00000557496 CLCA2Q9UQC9 943 aa3.82□□□□□ -1.8
FOXN3-216ENST00000557496 CD2APQ9Y5K6 639 aa3.82□□□□□ -1.8
FOXN3-216ENST00000557496 ZMYM3Q14202 1370 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 MARCH11A6NNE9 402 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 MASP2O00187 686 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 TMEM127O75204 238 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 LTA4HP09960 611 aaKnown RBP3.81□□□□□ -1.8
FOXN3-216ENST00000557496 BMPR1AP36894 532 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 USP14P54578 494 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 MANFP55145 182 aaKnown RBP3.81□□□□□ -1.8
FOXN3-216ENST00000557496 C21orf58P58505 322 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 RNASE9P60153 205 aaKnown RBP3.81□□□□□ -1.8
FOXN3-216ENST00000557496 MEF2AQ02078 507 aaPredicted RBP3.81□□□□□ -1.8
FOXN3-216ENST00000557496 NHLH2Q02577 135 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 PPARAQ07869 468 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 UBE3CQ15386 1083 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 TCEA2Q15560 299 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 SEPT7Q16181 437 aaKnown RBP3.81□□□□□ -1.8
FOXN3-216ENST00000557496 STRIP1Q5VSL9 837 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 LRCH2Q5VUJ6 765 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 SUPT20HQ8NEM7 779 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 OR10H5Q8NGA6 315 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 LINC00476Q8WZB0 136 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 TEX101Q9BY14 249 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 WNT8AQ9H1J5 351 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 R3HDMLQ9H3Y0 253 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 ZSWIM4Q9H7M6 989 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 SPON1Q9HCB6 807 aa3.81□□□□□ -1.8
FOXN3-216ENST00000557496 SPTLC3Q9NUV7 552 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms