RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ITGA4P13612 1032 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 AKAP5P24588 427 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 NASPP49321 788 aaPredicted RBP15.09■□□□□ 0.01
SNX6-203ENST00000555416 HYAL1Q12794 435 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 PPP2R5AQ15172 486 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 MAPK6Q16659 721 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 SLC27A1Q6PCB7 646 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 SLC39A11Q8N1S5 342 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 ATXN2LQ8WWM7 1075 aaKnown RBP15.09■□□□□ 0.01
SNX6-203ENST00000555416 RAD54LQ92698 747 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 HLA-CQ95604 372 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 PGBD4Q96DM1 585 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 IFT74Q96LB3 600 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 ZFP42Q96MM3 310 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 ASB2Q96Q27 587 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 GAD1Q99259 594 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 COL25A1Q9BXS0 654 aaPredicted RBP15.09■□□□□ 0.01
SNX6-203ENST00000555416 CCSER1Q9C0I3 900 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 GBP3Q9H0R5 595 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 C2orf40Q9H1Z8 148 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 AAASQ9NRG9 546 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 A0A087X0B3 334 aa15.08■□□□□ 0
SNX6-203ENST00000555416 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.08■□□□□ 0
SNX6-203ENST00000555416 ARL5CA6NH57 179 aa15.08■□□□□ 0
SNX6-203ENST00000555416 CCDC169A6NNP5 214 aa15.08■□□□□ 0
SNX6-203ENST00000555416 LINC01565O15544 149 aa15.08■□□□□ 0
SNX6-203ENST00000555416 ZC3H11AO75152 810 aaKnown RBP eCLIP15.08■□□□□ 0
SNX6-203ENST00000555416 POMCP01189 267 aa15.08■□□□□ 0
SNX6-203ENST00000555416 MLH1P40692 756 aa15.08■□□□□ 0
SNX6-203ENST00000555416 SLC11A1P49279 550 aa15.08■□□□□ 0
SNX6-203ENST00000555416 MRPS5P82675 430 aaKnown RBP15.08■□□□□ 0
SNX6-203ENST00000555416 PLCB3Q01970 1234 aa15.08■□□□□ 0
SNX6-203ENST00000555416 NCBP1Q09161 790 aaKnown RBP15.08■□□□□ 0
SNX6-203ENST00000555416 PRPF4BQ13523 1007 aaKnown RBP15.08■□□□□ 0
SNX6-203ENST00000555416 COL19A1Q14993 1142 aa15.08■□□□□ 0
SNX6-203ENST00000555416 GPBP1Q86WP2 473 aa15.08■□□□□ 0
SNX6-203ENST00000555416 LINC00301Q8NCQ3 95 aa15.08■□□□□ 0
SNX6-203ENST00000555416 GSTCDQ8NEC7 633 aa15.08■□□□□ 0
SNX6-203ENST00000555416 CALML4Q96GE6 196 aa15.08■□□□□ 0
SNX6-203ENST00000555416 CHAMP1Q96JM3 812 aa15.08■□□□□ 0
SNX6-203ENST00000555416 PRIMPOLQ96LW4 560 aa15.08■□□□□ 0
SNX6-203ENST00000555416 VN1R3Q9BXE9 311 aa15.08■□□□□ 0
SNX6-203ENST00000555416 MRPL9Q9BYD2 267 aaKnown RBP15.08■□□□□ 0
SNX6-203ENST00000555416 UBE2ZQ9H832 354 aaPredicted RBP15.08■□□□□ 0
SNX6-203ENST00000555416 SPG21Q9NZD8 308 aa15.08■□□□□ 0
SNX6-203ENST00000555416 KLK14Q9P0G3 267 aa15.08■□□□□ 0
SNX6-203ENST00000555416 ARHGAP28Q9P2N2 729 aa15.08■□□□□ 0
SNX6-203ENST00000555416 F8W810 466 aa15.07■□□□□ 0
SNX6-203ENST00000555416 FSCN2O14926 492 aa15.07■□□□□ 0
SNX6-203ENST00000555416 INPPL1O15357 1258 aa15.07■□□□□ 0
SNX6-203ENST00000555416 SLC26A4O43511 780 aa15.07■□□□□ 0
SNX6-203ENST00000555416 F13A1P00488 732 aa15.07■□□□□ 0
SNX6-203ENST00000555416 GALTP07902 379 aa15.07■□□□□ 0
SNX6-203ENST00000555416 LTBRP36941 435 aa15.07■□□□□ 0
SNX6-203ENST00000555416 SCNN1GP51170 649 aa15.07■□□□□ 0
SNX6-203ENST00000555416 EFNA5P52803 228 aa15.07■□□□□ 0
SNX6-203ENST00000555416 RBM10P98175 930 aaKnown RBP15.07■□□□□ 0
SNX6-203ENST00000555416 RNASELQ05823 741 aaKnown RBP15.07■□□□□ 0
SNX6-203ENST00000555416 DLX2Q07687 328 aaPredicted RBP15.07■□□□□ 0
SNX6-203ENST00000555416 DMP1Q13316 513 aaPredicted RBP15.07■□□□□ 0
SNX6-203ENST00000555416 KCTD17Q8N5Z5 321 aa15.07■□□□□ 0
SNX6-203ENST00000555416 MRPS27Q92552 414 aaKnown RBP15.07■□□□□ 0
SNX6-203ENST00000555416 DRC1Q96MC2 740 aa15.07■□□□□ 0
SNX6-203ENST00000555416 REEP2Q9BRK0 252 aa15.07■□□□□ 0
SNX6-203ENST00000555416 IGFLR1Q9H665 355 aa15.07■□□□□ 0
SNX6-203ENST00000555416 KMT5AQ9NQR1 393 aa15.07■□□□□ 0
SNX6-203ENST00000555416 COG5Q9UP83 839 aa15.07■□□□□ 0
SNX6-203ENST00000555416 ZDHHC9Q9Y397 364 aa15.07■□□□□ 0
SNX6-203ENST00000555416 MORC2Q9Y6X9 1032 aaPredicted RBP15.07■□□□□ 0
SNX6-203ENST00000555416 H3BQ06 376 aaPredicted RBP15.06■□□□□ 0
SNX6-203ENST00000555416 K7ERI5 159 aa15.06■□□□□ 0
SNX6-203ENST00000555416 ABLIM1O14639 778 aa15.06■□□□□ 0
SNX6-203ENST00000555416 N4BP3O15049 544 aa15.06■□□□□ 0
SNX6-203ENST00000555416 PER2O15055 1255 aa15.06■□□□□ 0
SNX6-203ENST00000555416 BMP1P13497 986 aa15.06■□□□□ 0
SNX6-203ENST00000555416 PLS3P13797 630 aa15.06■□□□□ 0
SNX6-203ENST00000555416 KCNA5P22460 613 aa15.06■□□□□ 0
SNX6-203ENST00000555416 UBE3AQ05086 875 aa15.06■□□□□ 0
SNX6-203ENST00000555416 GIT2Q14161 759 aa15.06■□□□□ 0
SNX6-203ENST00000555416 CTC1Q2NKJ3 1217 aa15.06■□□□□ 0
SNX6-203ENST00000555416 TJAP1Q5JTD0 557 aa15.06■□□□□ 0
SNX6-203ENST00000555416 RBM23Q86U06 439 aaKnown RBP15.06■□□□□ 0
SNX6-203ENST00000555416 KRI1Q8N9T8 703 aaKnown RBP15.06■□□□□ 0
SNX6-203ENST00000555416 TMEM161BQ8NDZ6 487 aa15.06■□□□□ 0
SNX6-203ENST00000555416 CNNM3Q8NE01 707 aa15.06■□□□□ 0
SNX6-203ENST00000555416 NECAB3Q96P71 396 aaPredicted RBP15.06■□□□□ 0
SNX6-203ENST00000555416 NTPCRQ9BSD7 190 aaKnown RBP15.06■□□□□ 0
SNX6-203ENST00000555416 TARS2Q9BW92 718 aaKnown RBP15.06■□□□□ 0
SNX6-203ENST00000555416 PANK2Q9BZ23 570 aa15.06■□□□□ 0
SNX6-203ENST00000555416 TRIM6Q9C030 488 aaPredicted RBP15.06■□□□□ 0
SNX6-203ENST00000555416 TLR9Q9NR96 1032 aa15.06■□□□□ 0
SNX6-203ENST00000555416 SNTG2Q9NY99 539 aa15.06■□□□□ 0
SNX6-203ENST00000555416 CACNG4Q9UBN1 327 aa15.06■□□□□ 0
SNX6-203ENST00000555416 TTC28Q96AY4 2481 aa15.06■□□□□ 0
SNX6-203ENST00000555416 CUL9Q8IWT3 2517 aa15.06■□□□□ 0
SNX6-203ENST00000555416 TCF20Q9UGU0 1960 aaKnown RBP15.05■□□□□ 0
SNX6-203ENST00000555416 HIDE1A8MVS5 230 aa15.05■□□□□ -0
SNX6-203ENST00000555416 DLL1O00548 723 aa15.05■□□□□ -0
SNX6-203ENST00000555416 NRIP1P48552 1158 aa15.05■□□□□ -0
SNX6-203ENST00000555416 ALDH7A1P49419 539 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms