RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 CHP1Q99653 195 aa10.72□□□□□ -0.69
TMEM116-216ENST00000552800 C16orf70Q9BSU1 422 aa10.72□□□□□ -0.69
TMEM116-216ENST00000552800 AZI2Q9H6S1 392 aa10.72□□□□□ -0.69
TMEM116-216ENST00000552800 ZNF408Q9H9D4 720 aa10.72□□□□□ -0.69
TMEM116-216ENST00000552800 L2HGDHQ9H9P8 463 aa10.72□□□□□ -0.69
TMEM116-216ENST00000552800 SIX2Q9NPC8 291 aa10.72□□□□□ -0.69
TMEM116-216ENST00000552800 GPRC5CQ9NQ84 441 aa10.72□□□□□ -0.69
TMEM116-216ENST00000552800 ZNHIT6Q9NWK9 470 aaKnown RBP10.72□□□□□ -0.69
TMEM116-216ENST00000552800 ERAP1Q9NZ08 941 aa10.72□□□□□ -0.69
TMEM116-216ENST00000552800 DENND3A2RUS2 1198 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 TMEM150BA6NC51 233 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 A6NJR5 290 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 CLIC2O15247 247 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 SLC16A4O15374 487 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 LDHAP00338 332 aaKnown RBP10.71□□□□□ -0.69
TMEM116-216ENST00000552800 ZNF157P51786 506 aaPredicted RBP10.71□□□□□ -0.69
TMEM116-216ENST00000552800 JAM2P57087 298 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 KRT83P78385 493 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 CDC42EP1Q00587 391 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 SREBF2Q12772 1141 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 GRM1Q13255 1194 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 ACVR2BQ13705 512 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 TUBB2AQ13885 445 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 PLCB4Q15147 1175 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 PTPN21Q16825 1174 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 C10orf76Q5T2E6 689 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 FAM102BQ5T8I3 360 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 SLC39A4Q6P5W5 647 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 PDXDC1Q6P996 788 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 C15orf39Q6ZRI6 1047 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 IRF2BP2Q7Z5L9 587 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 ADGRA3Q8IWK6 1321 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 C17orf53Q8N3J3 647 aaPredicted RBP10.71□□□□□ -0.69
TMEM116-216ENST00000552800 EHBP1Q8NDI1 1231 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 PARD3BQ8TEW8 1205 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 UBE2Q2Q8WVN8 375 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 CCDC43Q96MW1 224 aaKnown RBP10.71□□□□□ -0.69
TMEM116-216ENST00000552800 SPATA33Q96N06 139 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 TUBB2BQ9BVA1 445 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 CCDC113Q9H0I3 377 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 HAUS4Q9H6D7 363 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 POLD4Q9HCU8 107 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 HSPBP1Q9NZL4 362 aa10.71□□□□□ -0.69
TMEM116-216ENST00000552800 GNEQ9Y223 722 aaKnown RBP10.71□□□□□ -0.69
TMEM116-216ENST00000552800 SOWAHDA6NJG2 315 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 EPHB6O15197 1021 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 ALDH1A1P00352 501 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 SERPING1P05155 500 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 UCHL3P15374 230 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 PROZP22891 400 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 CYLC1P35663 651 aaPredicted RBP10.7□□□□□ -0.7
TMEM116-216ENST00000552800 ARHGAP25P42331 645 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 KLK7P49862 253 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 VAMP7P51809 220 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 POLGP54098 1239 aaPredicted RBP10.7□□□□□ -0.7
TMEM116-216ENST00000552800 GOLGA8FQ08AF8 430 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 GOLGA8DPQ0D2H9 430 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 AMHR2Q16671 573 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 SWT1Q5T5J6 900 aaKnown RBP10.7□□□□□ -0.7
TMEM116-216ENST00000552800 TOGARAM2Q6ZUX3 1019 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 USP37Q86T82 979 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 DPP9Q86TI2 863 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 SYCP3Q8IZU3 236 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 KIF18AQ8NI77 898 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 NPLOC4Q8TAT6 608 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 CPLX3Q8WVH0 158 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 PSPC1Q8WXF1 523 aaKnown RBP10.7□□□□□ -0.7
TMEM116-216ENST00000552800 JAKMIP2Q96AA8 810 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 FAXDC2Q96IV6 333 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 FAM81BQ96LP2 452 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 STK33Q9BYT3 514 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 POLR3FQ9H1D9 316 aaPredicted RBP10.7□□□□□ -0.7
TMEM116-216ENST00000552800 FZD8Q9H461 694 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 MMRN2Q9H8L6 949 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 NHEJ1Q9H9Q4 299 aaPredicted RBP10.7□□□□□ -0.7
TMEM116-216ENST00000552800 PDGFCQ9NRA1 345 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 ARHGAP20Q9P2F6 1191 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 NENFQ9UMX5 172 aa10.7□□□□□ -0.7
TMEM116-216ENST00000552800 REXO2Q9Y3B8 237 aaKnown RBP10.7□□□□□ -0.7
TMEM116-216ENST00000552800 A0A0B4J269 797 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 BTNL10A8MVZ5 291 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 ANKRD63C9JTQ0 380 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 K7ERI5 159 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 NOP56O00567 594 aaKnown RBP10.69□□□□□ -0.7
TMEM116-216ENST00000552800 CTIFO43310 598 aaKnown RBP10.69□□□□□ -0.7
TMEM116-216ENST00000552800 CA12O43570 354 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 EXTL3O43909 919 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 EXOC3O60645 756 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 MSCO60682 206 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 ZC3H11AO75152 810 aaKnown RBP eCLIP10.69□□□□□ -0.7
TMEM116-216ENST00000552800 ZNF865P0CJ78 1059 aaPredicted RBP10.69□□□□□ -0.7
TMEM116-216ENST00000552800 GPC3P51654 580 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 PCBP1Q15365 356 aaKnown RBP eCLIP10.69□□□□□ -0.7
TMEM116-216ENST00000552800 MTERF2Q49AM1 385 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 EPC2Q52LR7 807 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 CREBRFQ8IUR6 639 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 KSR1Q8IVT5 923 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 FBXO16Q8IX29 292 aaPredicted RBP10.69□□□□□ -0.7
TMEM116-216ENST00000552800 SMC1BQ8NDV3 1235 aa10.69□□□□□ -0.7
TMEM116-216ENST00000552800 ANKK1Q8NFD2 765 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms