RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 ELL2O00472 640 aaPredicted RBP3.31□□□□□ -1.88
CEP290-204ENST00000547926 PRPF6O94906 941 aaKnown RBP3.31□□□□□ -1.88
CEP290-204ENST00000547926 ID4P47928 161 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 FAM111BQ6SJ93 734 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 HTR3DQ70Z44 454 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 ANKRD53Q8N9V6 530 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 OR2W6PQ8NHA6 318 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 E2F7Q96AV8 911 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 WDR11Q9BZH6 1224 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 EMC7Q9NPA0 242 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 SYBUQ9NX95 663 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 MSRAQ9UJ68 235 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 MAPRE3Q9UPY8 281 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 MAFO75444 373 aaPredicted RBP3.31□□□□□ -1.88
CEP290-204ENST00000547926 ABCG1P45844 678 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 MASP1P48740 699 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 MAP3K12Q12852 859 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 STRN3Q13033 797 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 SART3Q15020 963 aaKnown RBP3.31□□□□□ -1.88
CEP290-204ENST00000547926 PRR16Q569H4 304 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 KANSL1Q7Z3B3 1105 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 NME9Q86XW9 330 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 PHYKPLQ8IUZ5 450 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 CMTR2Q8IYT2 770 aaKnown RBP3.31□□□□□ -1.88
CEP290-204ENST00000547926 SIMC1Q8NDZ2 872 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 SLC29A3Q9BZD2 475 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 SERHL2Q9H4I8 314 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 MTG2Q9H4K7 406 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 CYP4F11Q9HBI6 524 aa3.31□□□□□ -1.88
CEP290-204ENST00000547926 AHRRA9YTQ3 701 aa3.3□□□□□ -1.88
CEP290-204ENST00000547926 NEMP1O14524 444 aa3.3□□□□□ -1.88
CEP290-204ENST00000547926 IKBKBO14920 756 aa3.3□□□□□ -1.88
CEP290-204ENST00000547926 MATN4O95460 622 aa3.3□□□□□ -1.88
CEP290-204ENST00000547926 KRTAP5-9P26371 169 aa3.3□□□□□ -1.88
CEP290-204ENST00000547926 LSSP48449 732 aa3.3□□□□□ -1.88
CEP290-204ENST00000547926 ADCY2Q08462 1091 aa3.3□□□□□ -1.88
CEP290-204ENST00000547926 ADCY1Q08828 1119 aa3.3□□□□□ -1.88
CEP290-204ENST00000547926 LRRC32Q14392 662 aa3.3□□□□□ -1.88
CEP290-204ENST00000547926 TERF2Q15554 542 aa3.3□□□□□ -1.88
CEP290-204ENST00000547926 ZBTB41Q5SVQ8 909 aa3.3□□□□□ -1.88
CEP290-204ENST00000547926 BROXQ5VW32 411 aa3.3□□□□□ -1.88
CEP290-204ENST00000547926 GRASPQ7Z6J2 395 aaPredicted RBP3.3□□□□□ -1.88
CEP290-204ENST00000547926 ANKS1AQ92625 1134 aa3.3□□□□□ -1.88
CEP290-204ENST00000547926 KCMF1Q9P0J7 381 aa3.3□□□□□ -1.88
CEP290-204ENST00000547926 DNAI1Q9UI46 699 aa3.3□□□□□ -1.88
CEP290-204ENST00000547926 RBM8AQ9Y5S9 174 aaKnown RBP3.3□□□□□ -1.88
CEP290-204ENST00000547926 CGB1A6NKQ9 187 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 RBMXL2O75526 392 aaKnown RBP3.29□□□□□ -1.88
CEP290-204ENST00000547926 BPIP17213 487 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 HK1P19367 917 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 CD40P25942 277 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 MAPK7Q13164 816 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 DDB1Q16531 1140 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 DGKDQ16760 1214 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 EGFLAMQ63HQ2 1017 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 KIAA1841Q6NSI8 718 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 CCDC62Q6P9F0 684 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 HDGFL2Q7Z4V5 671 aaPredicted RBP3.29□□□□□ -1.88
CEP290-204ENST00000547926 C1QL2Q7Z5L3 287 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 SRRM1Q8IYB3 904 aaKnown RBP3.29□□□□□ -1.88
CEP290-204ENST00000547926 ZZZ3Q8IYH5 903 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 NKD2Q969F2 451 aaPredicted RBP3.29□□□□□ -1.88
CEP290-204ENST00000547926 DYDC2Q96IM9 177 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 PITHD1Q9GZP4 211 aaPredicted RBP3.29□□□□□ -1.88
CEP290-204ENST00000547926 HAPLN2Q9GZV7 340 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 SLKQ9H2G2 1235 aaPredicted RBP3.29□□□□□ -1.88
CEP290-204ENST00000547926 SAE1Q9UBE0 346 aaPredicted RBP3.29□□□□□ -1.88
CEP290-204ENST00000547926 DENND2AQ9ULE3 1009 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 SALL3Q9BXA9 1300 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 OPHN1O60890 802 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 PCDH8O95206 1070 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 HNRNPLP14866 589 aaKnown RBP eCLIP3.29□□□□□ -1.88
CEP290-204ENST00000547926 BCAR1P56945 870 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 PHC1P78364 1004 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 DHCR24Q15392 516 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 ATP13A4Q4VNC1 1196 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 TIGD2Q4W5G0 525 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 TIGD7Q6NT04 549 aaPredicted RBP3.29□□□□□ -1.88
CEP290-204ENST00000547926 DDX46Q7L014 1031 aaKnown RBP3.29□□□□□ -1.88
CEP290-204ENST00000547926 BMP8AQ7Z5Y6 402 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 PASD1Q8IV76 773 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 ZNF610Q8N9Z0 462 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 SMG7Q92540 1137 aaKnown RBP3.29□□□□□ -1.88
CEP290-204ENST00000547926 USP7Q93009 1102 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 SOX7Q9BT81 388 aa3.29□□□□□ -1.88
CEP290-204ENST00000547926 FAM126AQ9BYI3 521 aaPredicted RBP3.29□□□□□ -1.88
CEP290-204ENST00000547926 A0A0A6YYJ9 748 aa3.28□□□□□ -1.88
CEP290-204ENST00000547926 SCAF4O95104 1147 aaKnown RBP3.28□□□□□ -1.88
CEP290-204ENST00000547926 CLEC2LP0C7M8 214 aa3.28□□□□□ -1.88
CEP290-204ENST00000547926 OCRLQ01968 901 aa3.28□□□□□ -1.88
CEP290-204ENST00000547926 PDCD1Q15116 288 aa3.28□□□□□ -1.88
CEP290-204ENST00000547926 TAF7LQ5H9L4 462 aa3.28□□□□□ -1.88
CEP290-204ENST00000547926 KLHDC10Q6PID8 442 aa3.28□□□□□ -1.88
CEP290-204ENST00000547926 C11orf74Q86VG3 221 aa3.28□□□□□ -1.88
CEP290-204ENST00000547926 RPGRQ92834 1020 aaKnown RBP3.28□□□□□ -1.88
CEP290-204ENST00000547926 SLC5A5Q92911 643 aa3.28□□□□□ -1.88
CEP290-204ENST00000547926 WDR92Q96MX6 357 aa3.28□□□□□ -1.88
CEP290-204ENST00000547926 PRDM12Q9H4Q4 367 aa3.28□□□□□ -1.88
CEP290-204ENST00000547926 CAAP1Q9H8G2 361 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms