RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 GPR108Q9NPR9 543 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 XPNPEP3Q9NQH7 507 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 SEC31BQ9NQW1 1179 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 TLR9Q9NR96 1032 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 DZANK1Q9NVP4 752 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 MRPS18AQ9NVS2 196 aaKnown RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 BTBD7Q9P203 1132 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 TIMELESSQ9UNS1 1208 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 ZNF281Q9Y2X9 895 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 ZBTB32Q9Y2Y4 487 aaPredicted RBP0.47□□□□□ -2.33
CEP290-203ENST00000547691 SAMM50Q9Y512 469 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 INSL6Q9Y581 213 aa0.47□□□□□ -2.33
CEP290-203ENST00000547691 SCN8AQ9UQD0 1980 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 UMODL1Q5DID0 1318 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 ADGRA3Q8IWK6 1321 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 CEP192Q8TEP8 1941 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 BAZ2AQ9UIF9 1905 aaKnown RBP0.46□□□□□ -2.34
CEP290-203ENST00000547691 A0A1W2PQ27 194 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 A0A1W2PQ64 194 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 A0A1W2PQC6 194 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 A0A1W2PQD8 194 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 SSU72P8A0A1W2PR75 194 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 OR14I1A6ND48 311 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 USP17L5A8MUK1 530 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 C2CD4DB7Z1M9 353 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 USP17L15C9J2P7 530 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 USP17L13C9JLJ4 530 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 USP17L11C9JVI0 530 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 USP17L18D6R9N7 530 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 USP17L22D6RA61 530 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 USP17L17D6RBQ6 530 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 USP17L19D6RCP7 530 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 USP17L20D6RJB6 530 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 NPIPB8E9PQR5 432 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 RNF113AO15541 343 aaKnown RBP0.46□□□□□ -2.34
CEP290-203ENST00000547691 PI15O43692 258 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 KINO60870 393 aaKnown RBP0.46□□□□□ -2.34
CEP290-203ENST00000547691 NBNO60934 754 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 SUPT20HL2P0C7V6 817 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 DNAJB1P25685 340 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 GUCY1A2P33402 732 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 ARL4AP40617 200 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 DPP6P42658 865 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 CCNA1P78396 465 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 GUCA2AQ02747 115 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 USP17L24Q0WX57 530 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 TRA2AQ13595 282 aaKnown RBP eCLIP0.46□□□□□ -2.34
CEP290-203ENST00000547691 KRT40Q6A162 431 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 TAPT1Q6NXT6 567 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 FBXO38Q6PIJ6 1188 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 CRIP3Q6Q6R5 217 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 COPS6Q7L5N1 327 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 ANKRD18AQ8IVF6 992 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 KIAA1958Q8N8K9 716 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 KREMEN2Q8NCW0 462 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 FBLIM1Q8WUP2 373 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 SLC7A3Q8WY07 619 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 RFFLQ8WZ73 363 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 DNASE1L2Q92874 299 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 DDX11Q96FC9 970 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 ZNF512BQ96KM6 892 aaPredicted RBP0.46□□□□□ -2.34
CEP290-203ENST00000547691 KLHL5Q96PQ7 755 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 TREX2Q9BQ50 279 aaPredicted RBP0.46□□□□□ -2.34
CEP290-203ENST00000547691 XYLT2Q9H1B5 865 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 ALDH8A1Q9H2A2 487 aaPredicted RBP0.46□□□□□ -2.34
CEP290-203ENST00000547691 EHMT1Q9H9B1 1298 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 CHPF2Q9P2E5 772 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 CTNND2Q9UQB3 1225 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 STARD13Q9Y3M8 1113 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 PCDHGB2Q9Y5G2 931 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 NUP210LQ5VU65 1888 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 A0A1W2PQJ5 194 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 CHURC1-FNTBB4DL54 471 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 ARNTLO00327 626 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 CHL1O00533 1208 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 LINC01565O15544 149 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 FRAT2O75474 233 aaPredicted RBP0.46□□□□□ -2.34
CEP290-203ENST00000547691 DGKIO75912 1065 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 AFPP02771 609 aaKnown RBP0.46□□□□□ -2.34
CEP290-203ENST00000547691 ZNF883P0CG24 379 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 RARAP10276 462 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 RARBP10826 455 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 CR2P20023 1033 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 BMPR1AP36894 532 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 GDNFP39905 211 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 MTHFRP42898 656 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 NRLP54845 237 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 RHDQ02161 417 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 GABPAQ06546 454 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 SEMA3BQ13214 749 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 CCINQ13939 588 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 TTLL12Q14166 644 aaPredicted RBP0.46□□□□□ -2.34
CEP290-203ENST00000547691 NR1I3Q14994 352 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 CCDC85BQ15834 202 aaPredicted RBP0.46□□□□□ -2.34
CEP290-203ENST00000547691 CCDC96Q2M329 555 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 COL28A1Q2UY09 1125 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 TKFCQ3LXA3 575 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 FAM47AQ5JRC9 791 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 SPDYCQ5MJ68 293 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 HLA-DQA1Q5Y7H0 255 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms