RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 BMS1Q14692 1282 aaKnown RBP18.7■□□□□ 0.58
HOXD8-204ENST00000544999 TMC7Q7Z402 723 aa18.7■□□□□ 0.58
HOXD8-204ENST00000544999 ZNF280BQ86YH2 543 aa18.7■□□□□ 0.58
HOXD8-204ENST00000544999 IGSF21Q96ID5 467 aa18.7■□□□□ 0.58
HOXD8-204ENST00000544999 AK8Q96MA6 479 aa18.7■□□□□ 0.58
HOXD8-204ENST00000544999 TMEM175Q9BSA9 504 aa18.7■□□□□ 0.58
HOXD8-204ENST00000544999 CCDC113Q9H0I3 377 aa18.7■□□□□ 0.58
HOXD8-204ENST00000544999 GBP3Q9H0R5 595 aa18.7■□□□□ 0.58
HOXD8-204ENST00000544999 DNAJB4Q9UDY4 337 aa18.7■□□□□ 0.58
HOXD8-204ENST00000544999 CD207Q9UJ71 328 aa18.7■□□□□ 0.58
HOXD8-204ENST00000544999 HES2Q9Y543 173 aa18.7■□□□□ 0.58
HOXD8-204ENST00000544999 ZMYM2Q9UBW7 1377 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 CUL9Q8IWT3 2517 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 VCANP13611 3396 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 K7ELQ4 463 aaPredicted RBP18.69■□□□□ 0.58
HOXD8-204ENST00000544999 ACKR2O00590 384 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 N4BP3O15049 544 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 PER2O15055 1255 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 SLC26A4O43511 780 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 DDHD2O94830 711 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 GLP2RO95838 553 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 PRKCBP05771 671 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 SLC11A1P49279 550 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 SMAD4Q13485 552 aaKnown RBP18.69■□□□□ 0.58
HOXD8-204ENST00000544999 SMC1AQ14683 1233 aaKnown RBP18.69■□□□□ 0.58
HOXD8-204ENST00000544999 RINT1Q6NUQ1 792 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 KCNK18Q7Z418 384 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 DDX53Q86TM3 631 aaKnown RBP18.69■□□□□ 0.58
HOXD8-204ENST00000544999 TMEM173Q86WV6 379 aaPredicted RBP18.69■□□□□ 0.58
HOXD8-204ENST00000544999 CDR2LQ86X02 465 aaPredicted RBP18.69■□□□□ 0.58
HOXD8-204ENST00000544999 FAM178BQ8IXR5 827 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 MSLNLQ96KJ4 702 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 PNMA5Q96PV4 448 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 GAD1Q99259 594 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 TIPINQ9BVW5 301 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 NXF3Q9H4D5 531 aaKnown RBP18.69■□□□□ 0.58
HOXD8-204ENST00000544999 CLEC1BQ9P126 229 aa18.69■□□□□ 0.58
HOXD8-204ENST00000544999 DAXXQ9UER7 740 aaPredicted RBP18.69■□□□□ 0.58
HOXD8-204ENST00000544999 ARL5CA6NH57 179 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 HIDE1A8MVS5 230 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 MBTPS2O43462 519 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 B4GALT3O60512 393 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 POMCP01189 267 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 MLH1P40692 756 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 EFNA5P52803 228 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 COASYQ13057 564 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 PRPF4BQ13523 1007 aaKnown RBP18.68■□□□□ 0.58
HOXD8-204ENST00000544999 ZRSR1Q15695 479 aaKnown RBP18.68■□□□□ 0.58
HOXD8-204ENST00000544999 CLUL1Q15846 466 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 C1orf186Q6ZWK4 172 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 CDK5RAP3Q96JB5 506 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 DRC1Q96MC2 740 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 RUSC1Q9BVN2 902 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 APOL6Q9BWW8 343 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 ZBP1Q9H171 429 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 PDZD7Q9H5P4 517 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 POLD4Q9HCU8 107 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 STK39Q9UEW8 545 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 GTF3C3Q9Y5Q9 886 aa18.68■□□□□ 0.58
HOXD8-204ENST00000544999 TDRD15B5MCY1 1934 aaKnown RBP18.68■□□□□ 0.58
HOXD8-204ENST00000544999 C2orf71A6NGG8 1288 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 HIP1RO75146 1068 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 ALDH2P05091 517 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 SRGAP2BP0DMP2 458 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 SYT1P21579 422 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 KCNC3Q14003 757 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 SF3A1Q15459 793 aaKnown RBP18.67■□□□□ 0.58
HOXD8-204ENST00000544999 SMAD2Q15796 467 aaKnown RBP18.67■□□□□ 0.58
HOXD8-204ENST00000544999 TMEM132AQ24JP5 1023 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 TMEM119Q4V9L6 283 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 CABP7Q86V35 215 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 COLGALT2Q8IYK4 626 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 VPS52Q8N1B4 723 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 MRPL43Q8N983 215 aaKnown RBP18.67■□□□□ 0.58
HOXD8-204ENST00000544999 SYT2Q8N9I0 419 aaPredicted RBP18.67■□□□□ 0.58
HOXD8-204ENST00000544999 BCL7CQ8WUZ0 217 aaPredicted RBP18.67■□□□□ 0.58
HOXD8-204ENST00000544999 ADPGKQ9BRR6 497 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 KIFC3Q9BVG8 833 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 C17orf75Q9HAS0 396 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 MIOSQ9NXC5 875 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 PRKAG3Q9UGI9 489 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 BARX2Q9UMQ3 279 aaPredicted RBP18.67■□□□□ 0.58
HOXD8-204ENST00000544999 FAN1Q9Y2M0 1017 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 TTC28Q96AY4 2481 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 XIRP2A4UGR9 3374 aa18.67■□□□□ 0.58
HOXD8-204ENST00000544999 TTLL13PA6NNM8 815 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 NRP1O14786 923 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 CTSAP10619 480 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 LIG1P18858 919 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 AKAP5P24588 427 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 GUCY2CP25092 1073 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 LONP1P36776 959 aaKnown RBP18.66■□□□□ 0.58
HOXD8-204ENST00000544999 SCNN1GP51170 649 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 PEX3P56589 373 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 DSC1Q08554 894 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 MAPK7Q13164 816 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 DMP1Q13316 513 aaPredicted RBP18.66■□□□□ 0.58
HOXD8-204ENST00000544999 GIT2Q14161 759 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 TMEM184AQ6ZMB5 413 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 DAW1Q8N136 415 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms