RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 ATP2C1P98194 919 aaPredicted RBP14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 CUL4AQ13619 759 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 RILPL1Q5EBL4 403 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 SYCE2Q6PIF2 218 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 TMC7Q7Z402 723 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 DDX53Q86TM3 631 aaKnown RBP14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 CDR2LQ86X02 465 aaPredicted RBP14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 VPS52Q8N1B4 723 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 SUSD6Q92537 303 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 TMEM169Q96HH4 297 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 GAD1Q99259 594 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 BACH2Q9BYV9 841 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 CCDC113Q9H0I3 377 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 UBN1Q9NPG3 1134 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 DDX19AQ9NUU7 478 aaKnown RBP14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 KANSL3Q9P2N6 904 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 IRAK3Q9Y616 596 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 CARNS1A5YM72 827 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 LRRIQ4A6NIV6 560 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 LILRB3O75022 631 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 CLASP2O75122 1294 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 CXCL14O95715 111 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 POMCP01189 267 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 DSC1Q08554 894 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 NCBP1Q09161 790 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 SMC1AQ14683 1233 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 MCTP1Q6DN14 999 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 SLC27A1Q6PCB7 646 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 DTHD1Q6ZMT9 781 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 KCNK18Q7Z418 384 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 COLGALT2Q8IYK4 626 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 DAW1Q8N136 415 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 URGCPQ8TCY9 931 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 SNX29Q8TEQ0 813 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 PRIMPOLQ96LW4 560 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 ZFP42Q96MM3 310 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 TMEM175Q9BSA9 504 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 GBP3Q9H0R5 595 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 NXF3Q9H4D5 531 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 PRMT7Q9NVM4 692 aaPredicted RBP14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 MARCH5Q9NX47 278 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 SMC3Q9UQE7 1217 aa14.51□□□□□ -0.09
TNFRSF1A-215ENST00000543359 FSD2A1L4K1 749 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 E9PMD0 336 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 ACKR2O00590 384 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 NRP1O14786 923 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 ALDH2P05091 517 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 CTSAP10619 480 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 MLH1P40692 756 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 RNASELQ05823 741 aaKnown RBP14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 HYIQ5T013 277 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 LARP1BQ659C4 914 aaKnown RBP14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 ANKRD54Q6NXT1 300 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 AUTS2Q8WXX7 1259 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 PNMA5Q96PV4 448 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 C1QTNF1Q9BXJ1 281 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 PDZD7Q9H5P4 517 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 USP20Q9Y2K6 914 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 GIT1Q9Y2X7 761 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 USP15Q9Y4E8 981 aaPredicted RBP14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 STK24Q9Y6E0 443 aa14.5□□□□□ -0.09
TNFRSF1A-215ENST00000543359 TDRD15B5MCY1 1934 aaKnown RBP14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 H3BQV1 296 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 NPTXRO95502 500 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 AKAP5P24588 427 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 SSTR3P32745 418 aaPredicted RBP14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 NAMPTP43490 491 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 SCNN1GP51170 649 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 NT5DC1Q5TFE4 455 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 KRT79Q5XKE5 535 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 RINT1Q6NUQ1 792 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 LLGL2Q6P1M3 1020 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 C1orf186Q6ZWK4 172 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 TAS1R1Q7RTX1 841 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 ZBTB8OSQ8IWT0 167 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 RNF168Q8IYW5 571 aaPredicted RBP14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 KIFC3Q9BVG8 833 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 RUSC1Q9BVN2 902 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 RAB34Q9BZG1 259 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 C2orf40Q9H1Z8 148 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 CXCL16Q9H2A7 254 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 FAN1Q9Y2M0 1017 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 HCFC2Q9Y5Z7 792 aa14.49□□□□□ -0.09
TNFRSF1A-215ENST00000543359 ZMYM2Q9UBW7 1377 aa14.48□□□□□ -0.09
TNFRSF1A-215ENST00000543359 LOC730098B7Z3J9 87 aa14.48□□□□□ -0.09
TNFRSF1A-215ENST00000543359 F8W810 466 aa14.48□□□□□ -0.09
TNFRSF1A-215ENST00000543359 GPR37L1O60883 481 aa14.48□□□□□ -0.09
TNFRSF1A-215ENST00000543359 MAPK7Q13164 816 aa14.48□□□□□ -0.09
TNFRSF1A-215ENST00000543359 CBX2Q14781 532 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF1A-215ENST00000543359 PTPN14Q15678 1187 aa14.48□□□□□ -0.09
TNFRSF1A-215ENST00000543359 EEF1DP3Q658K8 133 aa14.48□□□□□ -0.09
TNFRSF1A-215ENST00000543359 ARL6IP4Q66PJ3 421 aaKnown RBP14.48□□□□□ -0.09
TNFRSF1A-215ENST00000543359 SLC22A17Q8WUG5 538 aa14.48□□□□□ -0.09
TNFRSF1A-215ENST00000543359 KIFAP3Q92845 792 aa14.48□□□□□ -0.09
TNFRSF1A-215ENST00000543359 LRFN3Q9BTN0 628 aa14.48□□□□□ -0.09
TNFRSF1A-215ENST00000543359 DNM3Q9UQ16 869 aa14.48□□□□□ -0.09
TNFRSF1A-215ENST00000543359 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1A-215ENST00000543359 PRKCBP05771 671 aa14.47□□□□□ -0.09
TNFRSF1A-215ENST00000543359 HOXB8P17481 243 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms