RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 A0A0B4J269 797 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 C9IYK1 514 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 K7ENM7 598 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 BIN1O00499 593 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 KIAA0391O15091 583 aaKnown RBP6.43□□□□□ -1.38
ABCF1-207ENST00000542772 MAPK13O15264 365 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 CLDN3O15551 220 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 B4GALT5O43286 388 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 FAM189A1O60320 539 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 CAVIN2O95810 425 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 EOMESO95936 686 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 LDHAP00338 332 aaKnown RBP6.43□□□□□ -1.38
ABCF1-207ENST00000542772 CTSHP09668 335 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 CCDC192P0DO97 292 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 GHRP10912 638 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 CSF2RAP15509 400 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 ZSCAN20P17040 1043 aaPredicted RBP6.43□□□□□ -1.38
ABCF1-207ENST00000542772 FGFR4P22455 802 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 CD52P31358 61 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 LRRC63Q05C16 580 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 NFX1Q12986 1120 aaKnown RBP6.43□□□□□ -1.38
ABCF1-207ENST00000542772 PRPF4BQ13523 1007 aaKnown RBP6.43□□□□□ -1.38
ABCF1-207ENST00000542772 TCTN1Q2MV58 587 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 EDRF1Q3B7T1 1238 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 DPCR1Q3MIW9 517 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 ATF7IP2Q5U623 682 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 ANKRD40Q6AI12 368 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 TTI2Q6NXR4 508 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 LRSAM1Q6UWE0 723 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 CRELD2Q6UXH1 353 aaPredicted RBP6.43□□□□□ -1.38
ABCF1-207ENST00000542772 ALKAL1Q6UXT8 129 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 CATSPER4Q7RTX7 472 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 SMYD4Q8IYR2 804 aaPredicted RBP6.43□□□□□ -1.38
ABCF1-207ENST00000542772 GOLGA5Q8TBA6 731 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 ENOX1Q8TC92 643 aaKnown RBP6.43□□□□□ -1.38
ABCF1-207ENST00000542772 DPF3Q92784 378 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 BADQ92934 168 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 BORCS6Q96GS4 357 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 ZBTB45Q96K62 511 aaPredicted RBP6.43□□□□□ -1.38
ABCF1-207ENST00000542772 FBXL18Q96ME1 805 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 PPP1R16BQ96T49 567 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 DUSP9Q99956 384 aaKnown RBP6.43□□□□□ -1.38
ABCF1-207ENST00000542772 ANP32EQ9BTT0 268 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 IFIH1Q9BYX4 1025 aaKnown RBP6.43□□□□□ -1.38
ABCF1-207ENST00000542772 PPP1R12CQ9BZL4 782 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 IKZF4Q9H2S9 585 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 PDZD7Q9H5P4 517 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 ELAC1Q9H777 363 aaKnown RBP6.43□□□□□ -1.38
ABCF1-207ENST00000542772 RWDD2AQ9UIY3 292 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 MAPK8IP1Q9UQF2 711 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 GINS2Q9Y248 185 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 USP20Q9Y2K6 914 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 NR2E3Q9Y5X4 410 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 CNTNAP2Q9UHC6 1331 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 TANC1Q9C0D5 1861 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 ZMYM2Q9UBW7 1377 aa6.43□□□□□ -1.38
ABCF1-207ENST00000542772 ABHD14A-ACY1A0A1B0GW23 586 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.42□□□□□ -1.38
ABCF1-207ENST00000542772 SYCE3A1L190 88 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 LRRC10BA6NIK2 292 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 PSMA7O14818 248 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 N4BP3O15049 544 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 TNRC18O15417 2968 aaPredicted RBP6.42□□□□□ -1.38
ABCF1-207ENST00000542772 CALUO43852 315 aaPredicted RBP6.42□□□□□ -1.38
ABCF1-207ENST00000542772 MGEA5O60502 916 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 EFCAB14O75071 495 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 ERLIN2O94905 339 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 FGBP02675 491 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 MCF2P10911 925 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 SKIP12755 728 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 BMP8BP34820 402 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 PMS1P54277 932 aaKnown RBP6.42□□□□□ -1.38
ABCF1-207ENST00000542772 MARSP56192 900 aaKnown RBP6.42□□□□□ -1.38
ABCF1-207ENST00000542772 FKBP3Q00688 224 aaKnown RBP6.42□□□□□ -1.38
ABCF1-207ENST00000542772 TYRO3Q06418 890 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 ENPEPQ07075 957 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 PAK2Q13177 524 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 PPIGQ13427 754 aaKnown RBP eCLIP6.42□□□□□ -1.386e-13■□□□□ 8.8
ABCF1-207ENST00000542772 ADAM9Q13443 819 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 STIM1Q13586 685 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 IKBKEQ14164 716 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 NCAPHQ15003 741 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 IQCB1Q15051 598 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 STX1AQ16623 288 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 KYAT1Q16773 422 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 XKR4Q5GH76 650 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 TMEM240Q5SV17 173 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 RASIP1Q5U651 963 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 EEF1DP3Q658K8 133 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 NOTUMQ6P988 496 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 CNKSR3Q6P9H4 555 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 SLC27A1Q6PCB7 646 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 MPZL3Q6UWV2 235 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 SLC24A5Q71RS6 500 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 FILIP1Q7Z7B0 1213 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 ZNF598Q86UK7 904 aaKnown RBP6.42□□□□□ -1.38
ABCF1-207ENST00000542772 NELFCDQ8IXH7 590 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 C7orf61Q8IZ16 206 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 SYCP3Q8IZU3 236 aa6.42□□□□□ -1.38
ABCF1-207ENST00000542772 SMG8Q8ND04 991 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms